Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Profile of regulator HTCS_Rgu-1 in Bacteroidaceae

Properties
Regulator family: [Other]
Regulation mode: activator
Biological process: Rhamnogalacturonides utilization
Effector: Rhamogalacturonate oligosaccharides; Galacturonate oligosaccharides
Regulog: HTCS_Rgu-1 - Bacteroidaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Bacteroides cellulosilyticus DSM 14838
BACCELL_03135 susC_Rgu-1 -126 9 CAAAAAATACCA-(9)-CAGATATTACAC
BACCELL_03143 pehX1 -273 8.8 CAAAAAATCCAC-(9)-CAAATTGTGCAC
BACCELL_03119 rhiN -106 9.3 TAAATAATGCAC-(9)-CGAAAAGTACAC
Bacteroides dorei DSM 17855
BACDOR_03278 rhiN -105 9.4 CAAATAATACAC-(9)-TGAAAAGTGCAC
BACDOR_03257 plyC4 -106 8.9 TAAAATATACGA-(9)-CAAATATTACAA
BACDOR_03276 susC_Rgu-1 -124 9 TAATAAATCCAC-(9)-TAAAAACTACAC
BACDOR_03070 pehX1 -237 9.5 CAAAAAATCCAC-(9)-CAAATAGTGCAC
Bacteroides eggerthii DSM 20697
BACEGG_00870 susC_Rgu-1 -127 9.3 CAAAAAGTACCA-(9)-CAAAAATTACAC
BACEGG_00876 pehX1 -272 9.2 CAAAAAATACAC-(9)-CAATTAGTACAC
BACEGG_00863 rhiN -107 9.7 CAAAAAATGCAC-(9)-CAAAAAATGCAC
Bacteroides ovatus ATCC 8483
BACOVA_04911 susC_Rgu-1 -128 9.5 CAAAAAATACGA-(9)-CAAATATTGCAC
BACOVA_04900 rhiN -155 8.9 CAAAAAATGCAC-(9)-TAAAAAATCCCA
BACOVA_05040 pehX1 -267 9 CAAAAAATACAC-(9)-CAATTAGTCCAC
Bacteroides plebeius DSM 17135
BACPLE_03451 rhiN -108 7.7 CAATTTTTATAC-(9)-TGAAAACTACAC
BACPLE_03118 GH88 -222 7 CAGTTTTTTCAC-(9)-CAAAAATTGCAA
Bacteroides stercoris ATCC 43183
BACSTE_03304 rhiN -107 9.8 CAAAAAATGCAC-(9)-CAAAAAGTGCAC
BACSTE_03276 pehX1 -205 8.4 CAAAAAATACAC-(9)-CAATTTGTACAC
Bacteroides thetaiotaomicron VPI-5482
BT4116 plyC1 -119 9.8 CAAAAAATACAA-(9)-CAAATATTGCAC
BT4119 plyC2 -221 8.3 AAAATAGTGCAC-(9)-CAAAAAGTCCCC
BT4114 susC_Rgu-1 -127 9.4 CAAAAAATACTA-(9)-CAAATATTACAC
BT4108 rhiN -105 9.1 CAAAAAATACAC-(9)-TAAAAAATCCCA
BT4187 pehX1 -265 9 CAAAAAATACAC-(9)-CAATAACTCCAC
Bacteroides vulgatus ATCC 8482
BVU_1813 plyC4 -106 8.9 TAAAATATACGA-(9)-CAAATATTACAA
BVU_1797 rhiN -105 9.4 CAAATAATACAC-(9)-TGAAAAGTGCAC
BVU_1799 susC_Rgu-1 -123 9 TAATAAATCCAC-(9)-TAAAAACTACAC
BVU_1985 pehX1 -237 9.5 CAAAAAATCCAC-(9)-CAAATAGTGCAC
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Regulatory Sites [ FASTA format ] DOWNLOAD