Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Profile of regulator CcpA in Clostridia-2

Properties
Regulator family: LacI
Regulation mode: repressor (activator)
Biological process: Carbon catabolism; Carbohydrate metabolism
Effector: HPr, phosphocarrier protein
Regulog: CcpA - Clostridia-2
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Clostridium hiranonis DSM 13275
CLOHIR_01952 rnfC -190 3.6 TAGAAACATATATCTT
CLOHIR_01036 CD2693 18 4 AAGAAAAAAATTGGCT
CLOHIR_02123 CD3664 -31 4.3 AAATAAACATTTTCAT
CLOHIR_00161 grdX 47 4.2 AAAAGAAAGTTTTCCT
CLOHIR_00196 nanA -77 4.3 AGGAAAACGTTAATTA
CLOHIR_00161 grdX 116 4.3 TAGAAAATATATTCAT
CLOHIR_00162 trxB3 -97 4.3 CGGAAAACATTTACAA
CLOHIR_00836 cggR -163 4.4 GATATATCGTTTTCTT
CLOHIR_01291 aspB 232 4.9 AGGAAAACGATTTCGT
CLOHIR_00174 gatA -153 4.7 AAAAAAACATTTTCCT
CLOHIR_01724 fba -112 4.8 AAGAAAATGTTTGCAA
CLOHIR_01209 pgi -159 4.9 GAAAAAACGATTTCTT
CLOHIR_01209 pgi -11 4.1 AGAAAAATATTATGAT
CLOHIR_00956 CD2791 -141 4.3 GAGAATAAGTTATCAA
CLOHIR_00712 sigF -218 4 AATAAAAAGTTATTCT
Clostridium difficile 630
CD1477 null -51 4.7 AAGATAACGATTGCTT
CD0853 oppB -197 4.1 AATAAAATAATTTGAT
CD0854 oppC -305 4 AGCAAAAGGTTTAAAT
CD0530 null 11 4.1 TAAAAAACATTTTATT
CD0395 hadA -11 4.9 AGGAAAACGTTATGCT
CD0530 null -79 4.1 AGGAAAACGTATTATA
CD0850 null 169 4 TTGAAAATGTTTTGGT
CD2795 CD2795 12 4.5 AAAAAAATATTATCAT
CD2485 CD2385 221 4 TAGAACTCATTTTGAT
CD0209 CD0209 0 4.1 ATGAAAAAGTTACCAA
CD2514 tdcB -94 4.5 TAAAAATCGTTTACAT
CD2854 dltD 184 4.3 GAGAAAAGGATATTAT
CD0830 null -269 4.2 AAGAAAAAATTATATA
CD0201 null 78 4.5 GAGAAAATGTTTACAG
CD0394 ldhA -207 4.3 AAAATAACAATTTCTT
CD0394 ldhA -319 4.6 CAAAAAAAGTTTTCAT
CD1336 malX -141 3.9 TTGAAAAAATTTACAG
CD1387 null -127 4.2 AAGAACAGATTTTGCT
CD1322 dapG -124 4.1 AGAAAAAGGATTTTTT
CD0576 virS 93 4.9 GAGAAAAGGATTTCTA
CD0742 eutH -75 4.2 GGGAAAACGATACCAA
CD2625 CD2625 17 4.8 AGGAACAGGTTTACTT
CD3244 prdA -294 4.9 GAGAAAATGTTTACAA
CD2879 null -127 5 TAGATAAGGTTTTCTT
CD2693 CD2693 3 4 AAGAAAAAAATAGGTT
CD1657 gcvPB -493 4.1 GTGAAAATGTTATTTT
CD2355 trxA2 -6 4.2 AAGAAAATGTTAGATT
CD3664 CD3664 -31 5.4 AAGAAAACATTTTCAT
CD2354 grdE -211 4.4 AGAAAAAGGTTTTTAT
CD3649 rlmH 69 4.6 AAGAAAAGGCTTTCTA
CD2429 porA -10 4 GAGAAAAGGTATGCAA
CD2173 null 55 4 GAGAAAAAATTATAAA
CD2357 grdX 197 4.5 AGGAAATCGTTTGGAT
CD0394 ldhA -130 4.7 GGGAAAACAATTTCAA
CD3175 cggR -80 4 AAAATAAAAATATCTT
CD3175 cggR 108 4.2 AGGAGAACATTATCAA
CD2884 licB -187 5.2 ATGAAAAAGTTTTCTT
CD3218 CD3218 253 4.3 GAGTTAACGTTTTCAA
CD2347 CD2347 -31 3.8 AAGATAAAATTTATTA
CD2347 CD2347 175 4.3 CAGAAAAGGTTTGCAA
CD2344 null -153 4.3 AAGATAAAATTTTTTT
CD2702 brnQ -105 4.8 GGGAAAACGTTAACAA
CD2625 CD2625 -60 5.1 AGGATAACGTTATCAT
CD2481 ung 46 4.3 TTGAAAAAGATTACTA
CD1536 CD1536 232 4.3 AAGAAAACGATTTTGT
CD1586 null 112 5.1 TAGAAAAGGTTATCAT
CD1768 CD1768 -51 5.1 GAGAAAAGGTTTTGTT
CD1893 null -153 4.3 TAGAAATCGTTTAATT
CD2281 null -11 3.9 AGGAAATTATTATGAA
CD2600 cstA -68 5 TGGAAATAGTTTTCTT
CD0854 oppC -184 3.6 GAAAAAGTTTTTTCTT
CD0679 null 32 4.2 AAGAAATTATTTTGAA
CD0854 oppC -186 3.8 TTGAAAAAGTTTTTTC
CD0679 null -66 4.2 AGGAAATCGTATGCAT
CD0298 rbsR -27 4.3 AGTAAAACGGTTTCCT
CD0279A null -370 4.2 AAGAAAACGTTATTAC
CD0279A null -325 3.9 AATAAAAAGATTTTTA
CD2241 nanE -73 5.6 AAGAAAAAGTTTTCAT
CD1386 null -146 4.2 AAGAAAAGATATTGTT
CD1137 rnfC -184 3.8 ATGAAAAGGATTGTTT
CD1336 malX -39 4.6 TAGAAAACGTTTTAAA
CD1338 glvG -142 4.2 ATGAAAAAAATTACAA
CD2111 null -6 4.2 TAGAAAATGTTTGCAG
CD1893 null -76 5.1 TATAAAACGTTTTCTT
CD1935 spoVS -143 4.4 AAATAAAGGTTTTCTT
CD1385 null -110 4.4 AAGAAAGCGTTTTGAA
CD2327 gatA -114 5.3 GGGAAAACATTTTCTT
CD2283 null -71 4.3 TAGAAAAAAATATCAA
CD1214 spo0A -16 3.9 AAGAAGATGTTTTTTA
CD1214 spo0A -41 4.3 TGTAAAAAGTTTAGTT
CD1214 spo0A -134 3.8 ATTAAAAAATTTTATT
CD2280 null -101 3.9 GAAAAAACATTTTATA
CD3076 tagK -68 4.8 GTGAAAAGATTTTCAT
CD1321 null 25 4.8 AGGAAATAGTTAACTT
CD1387 null -55 3.9 TCGAAAAAAATAACTT
CD0855 oppA -302 3.8 AGGAATTGGTTTACCA
CD0679 null -168 4.7 ATGATAACATTTTCTT
CD0580 gapN -75 4.1 AAAGAAATGTTTACAT
CD0580 gapN -123 4.8 AGAAAAACGTTAACTT
CD0770 spoIIAA 88 4.5 AAGAAATAGATAACTT
CD2791 CD2791 -131 4.7 AAGAAAAAGTTTATAT
CD2756 ptsH -55 4.2 AGGAAAACAATTTTAA
CD0177 CD0177 -88 4.1 TGAAAAAATTTTACTT
CD0183 CD0183 3 4.1 AAGAAAAAGATATTAA
Clostridium bartlettii DSM 16795
CLOBAR_00380 cggR -16 4 AAAATAAAAATATCTT
CLOBAR_00645 licB -114 4.4 AGGAAAAGGGTTGCAT
CLOBAR_00039 rlmH 69 4.6 AAAAAAAGGTTATCTA
CLOBAR_01893 brnQ -75 4.1 GGAAAAAGGTTTATAT
CLOBAR_00380 cggR -51 4 GAGAAAACATATTGAA
CLOBAR_02757 ung -71 3.9 TTTAAATAATTTTCTT
CLOBAR_01505 rnfC -100 3.7 GATAAATAATTAACAA
CLOBAR_02382 tagK -79 4.2 TGAAAATGGTTTTCTA
CLOBAR_02247 spo0A -130 3.9 AGTAAATTGTATTCAT
CLOBAR_00319 pgi -172 4.2 GTGATATCGTTTTCAA
CLOBAR_02382 tagK -60 4.7 TTGAAAAGATTTTCAT
CLOBAR_00319 pgi -208 4.4 AGGAAAAATATATCAT
CLOBAR_02362 ptsH -39 3.8 AAAATAAAATTTTTAT
CLOBAR_01234 spoIIAA 2 3.8 GATAAAATGTTATTTA
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Regulatory Sites [ FASTA format ] DOWNLOAD