Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Profile of regulator PhnR in Pseudomonadaceae

Properties
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Phosphonate utilization; 2-aminoethylphosphonate utilization
Effector:
Regulog: PhnR - Pseudomonadaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Pseudomonas aeruginosa PAO1
PA2802 phnR3 -114 4.8 TGGTCTAGGCCA
PA3250 phnS -348 5.3 TGGTCTAGTCCA
PA3249 phnR -27 5.4 TGGACTAGACCA
PA3250 phnS -93 5.4 TGATCTAGACCA
PA3249 phnR -282 4.7 TGGTCTAGATCA
PA1144 null -263 5.4 TGGTCTAGACCA
PA1144 null -84 5.3 TGGCCTAGACCA
PA3255 COG0560 -50 4.7 TGGACGAGACCA
PA2803 phnX -31 5.3 TGGCCTAGACCA
Pseudomonas entomophila L48
PSEEN1439 phnR -261 4.1 TGGTCTAGGTCA
PSEEN1439 phnR -27 5.3 TGGACTAGTCCA
PSEEN1438 phnS -310 5.3 TGGACTAGTCCA
PSEEN1438 phnS -76 5.3 TGACCTAGACCA
Pseudomonas putida KT2440
PP1727 phnR -28 5.3 TGGACTAGTCCA
PP1727 phnR -251 4.1 TGGTCTAGGTCA
PP1726 phnS -311 5.3 TGGACTAGTCCA
PP1726 phnS -88 5.3 TGACCTAGACCA
Pseudomonas syringae pv. tomato str. DC3000
PSPTO3877 phnR -304 4.7 TGGTCTAGATCA
PSPTO3877 phnR -24 5.3 TGGTCTAGTCCA
PSPTO3878 phnS -345 5.4 TGGACTAGACCA
PSPTO3878 phnS -65 5.4 TGATCTAGACCA
Pseudomonas fluorescens Pf-5
PFL_4386 phnR -305 4.1 TGGTCTAGGTCA
PFL_4386 phnR -26 5.3 TGGTCTAGTCCA
PFL_4387 phnS -348 5.4 TGGACTAGACCA
PFL_4387 phnS -69 5.3 TGACCTAGACCA
Pseudomonas mendocina ymp
Pmen_1333 phnR -289 4.7 TGGTCTAGATCA
Pmen_1333 phnR -27 5.3 TGGACTAGTCCA
Pmen_1332 phnS -300 5.3 TGGACTAGTCCA
Pmen_1332 phnS -38 5.4 TGATCTAGACCA
Pmen_1925 phnX -29 4.8 TGGACTAGGCCA
Export
Regulatory Sites [ FASTA format ] DOWNLOAD