Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Profile of regulator FadP in Comamonadaceae

Properties
Regulator family: TetR
Regulation mode:
Biological process: Fatty acid degradation
Effector:
Regulog: FadP - Comamonadaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Acidovorax avenae subsp. citrulli AAC00-1
Aave_2880 fadB -41 5.3 AAGCACGACCGTTCTT
Aave_2168 etfB -142 5.3 AAGCACGATCGTTCTT
Aave_3139 etfD -121 5.4 AAGAACGATCGTTCGT
Aave_0441 null -31 5.3 AAGAACGATCGTGCTT
Aave_3439 acdQ -66 5.3 AAGCACGACCGTGCTA
Acidovorax sp. JS42
Ajs_2810 etfB -122 5.3 AAGCACGATCGTTCGT
Ajs_1950 etfD -117 4.9 GTGAACGACCGTGCGA
Ajs_0591 fadP -29 5.7 TAGAACGATCGTTCGT
Ajs_0365 null -31 5.3 ACGAACGATCGTTCTT
Ajs_3393 acdQ -43 4.7 AAGCACGCCCGTGCTA
Comamonas testosteroni KF-1
CtesDRAFT_0956 fadB -44 5.2 ACGCACGACCGTTCTT
CtesDRAFT_3565 null -69 5 ATGCACGACCGTTCGC
CtesDRAFT_3123 fadP -31 5.1 TAGAACGAACGTTCGT
Delftia acidovorans SPH-1
Daci_3313 fadB -41 5.5 TCGCACGATCGTTCTT
Daci_2390 etfB -138 5.2 TGGCACGATCGTTCTT
Daci_4310 etfD -60 4.5 CCGAACGAACGTTCGG
Daci_1336 fadP -33 5 TAGCACGAACGTTCGT
Polaromonas naphthalenivorans CJ2
Pnap_1842 fadB -106 4.9 AAGAACGGTCGTACTA
Pnap_1223 etfB -147 5.7 TAGAACGACCGTTCTT
Pnap_3478 fadP -31 5.7 TAGAACGACCGTTCTT
Pnap_3655 null -41 5.5 AAGAACGACCGTTCTA
Polaromonas sp. JS666
Bpro_3958 fadP -35 5.7 TAGAACGATCGTTCGT
Bpro_3143 etfB -142 5.7 TAGAACGACCGTTCTT
Bpro_4459 null -56 5.5 AAGAACGACCGTTCTA
Bpro_2573 fadB -86 4.9 AAGAACGGTCGTACTA
Rhodoferax ferrireducens DSM 15236
Rfer_2386 fadB -40 5.7 TCGCACGATCGTTCTA
Rfer_1957 etfB -163 5 AAGCACGACCGTACTA
Rfer_3018 etfD -85 5.5 AAGAACGATCGTTCTA
Rfer_3520 fadP -26 5.6 TAGCACGATCGTTCTT
Rfer_3608 null -29 5.5 TAGCACGGTCGTTCTA
Rfer_1646 acdQ -144 5.5 TCGCACGATCGTGCTA
Variovorax paradoxus S110
Vapar_3374 etfB -131 5.1 AAGCACGGTCGTTCTT
Vapar_0809 fadP -36 5.7 TAGAACGACCGTTCGT
Vapar_0572 null -32 5.5 TCGAACGATCGTTCGC
Vapar_1274 acdQ -87 5.2 CAGCACGACCGTGCTA
Verminephrobacter eiseniae EF01-2
Veis_1792 fadB -40 4.6 ACGCACGCCCGTTCTT
Veis_2104 acdQ -49 5.3 ACGAACGATCGTGCTA
Veis_1225 fadP 31 5.7 TAGAACGATCGTTCTT
Veis_3981 etfD -103 5 TGGAACGGTCGTTCGC
Methylibium petroleiphilum PM1
Mpe_A1775 fadB -47 5.7 TCGAACGATCGTTCTA
Mpe_A1296 etfB -98 5.1 CCGAACGATCGTGCTT
Mpe_A0420 fadP -34 5.8 TAGAACGATCGTTCGA
Mpe_A1443 etfD -87 5.7 TAGAACGACCGTTCGT
Leptothrix cholodnii SP-6
Lcho_2540 etfB -99 5.3 TAGTACGATCGTGCTT
Lcho_4033 fadP -30 5.7 TAGCACGATCGTTCGA
Lcho_2069 etfD -108 5.1 AAGCACGGTCGTGCTA
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Regulatory Sites [ FASTA format ] DOWNLOAD