Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Profile of regulator LiuR in Rhodobacterales

Properties
Regulator family: MerR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Regulog: LiuR - Rhodobacterales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Rhodobacter sphaeroides 2.4.1
RSP_2200 liuR -87 6.3 GTTTACGTCAACGTCAAG
Paracoccus denitrificans PD1222
Pden_2867 liuR 5 5.3 CCTTACGCGAACGTCAAC
Jannaschia sp. CCS1
Jann_2969 liuR -93 5.2 AATTACGTAAACGTCATC
Rhodobacterales bacterium HTCC2654
RB2654_20563 liuR -69 5.7 GTTGACGTAAACGTAATC
Loktanella vestfoldensis SKA53
SKA53_09319 liuR -84 6 GTTTACGTAAACGTCACC
Oceanicola batsensis HTCC2597
OB2597_06240 liuR -84 5.3 GCTTACGCTTGCGTCAAC
Roseovarius nubinhibens ISM
ISM_02035 liuR -79 5.8 ACTTACGTAAACGTCAAT
Roseovarius sp. 217
ROS217_11336 liuR -117 4.6 TCTTACGTCAACTTCAAA
Silicibacter TM1040
TM1040_1556 liuR -98 5.5 AGTTACGTAAACGTCAAG
Silicibacter pomeroyi DSS-3
SPO2914 liuR -87 6.3 GCTTACGTCAACGTCAAG
Roseobacter sp. MED193
MED193_05934 liuR -105 6.4 GCTTACGTAAACGTCAAG
Hyphomonas neptunium ATCC 15444
HNE_0667 liuR -83 5.1 GTTGACGTGCGCGGAAAG
HNE_0669 acdL -56 5.8 GCTTACGTGAACGTAAGC
HNE_0669 acdL -50 4.6 GTGAACGTAAGCGGCAAC
HNE_2094 acdL2 -95 5.4 GTTTACGTGCGCGTCACC
HNE_2706 acdA2 -88 5.4 GTTTACGTCAACGGAAGG
HNE_2820 null -64 5.2 GTTGACGTGAACGTCTGG
HNE_3471 eftB -98 5 CCTCACGTAAGCGTCAAG
Oceanicaulis alexandrii HTCC2633
OA2633_06094 liuR -36 5.9 GTTGACGTTCACGTCAAG
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Regulatory Sites [ FASTA format ] DOWNLOAD