Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Profile of regulator LiuR in Pseudomonadaceae

Properties
Regulator family: MerR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Regulog: LiuR - Pseudomonadaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Pseudomonas aeruginosa PAO1
PA2557 aacS -127 6.5 CTTTACGTTAACGTAAAC
PA2557 aacS -133 5.5 GTTTACCTTTACGTTAAC
PA2016 liuR -34 5.5 GTTAACGTAAAGGTAAAC
PA2016 liuR -40 6.5 CTTTACGTTAACGTAAAG
Pseudomonas entomophila L48
PSEEN3384 aacS -81 5.9 CTTTACGTAAACGTAAAT
PSEEN3384 aacS -131 6.2 GTTGACGTTAACGTAAAC
PSEEN2982 liuR -59 5.9 CTTGACGTATACGTAAAC
PSEEN3386 liuA -173 6.2 GTTTACGTTAACGTCAAC
PSEEN3386 liuA -217 5.1 GTTTACGTAAAGGTTATG
PSEEN3386 liuA -223 5.9 ATTTACGTTTACGTAAAG
Pseudomonas putida KT2440
PP4063 aacS -80 5.9 CTTTACGTAAACGTAAAT
PP4063 aacS -131 6.5 CTTTACGTTAACGTAAAC
PP3539 liuR -59 5.5 CTTGACGTATACGTCAAC
PP4064 liuA -97 6.5 GTTTACGTTAACGTAAAG
PP4064 liuA -148 5.9 ATTTACGTTTACGTAAAG
Pseudomonas syringae pv. tomato str. DC3000
PSPTO2739 liuA 109 6.5 gTTTACGTTAACGTAAAG
PSPTO2743 liuR -62 5.7 CTTGACGCTTACGTAAAG
Pseudomonas fluorescens Pf-5
PFL_3935 aacS -115 6 CTTTACGTAAACGTCAAC
PFL_3935 aacS -158 6.5 CTTTACGTTAACGTAAAC
PFL_3933 liuR -59 5.5 CTTGACGTATACGTCAAC
PFL_3936 liuA -88 6.5 GTTTACGTTAACGTAAAG
PFL_3936 liuA -131 6 GTTGACGTTTACGTAAAG
Pseudomonas mendocina ymp
Pmen_2034 liuR -23 5.5 GTTAACGTAAAGGTAAAC
Pmen_2034 liuR -29 6.5 GTTTACGTTAACGTAAAG
Pseudomonas stutzeri A1501
PST_3208 livG -70 5.4 GTTTACGTAAAGGTCATG
PST_3208 livG -76 5.2 GTTATCGTTTACGTAAAG
PST_3208 livG -99 4.6 CTTGCCGTATACGGAAAC
PST_3211 aacS -98 6.2 CTTTACGTTAACGTAATC
PST_3211 aacS -104 4.6 AGTTACCTTTACGTTAAC
PST_3213 liuA -133 6.5 CTTTACGTTAACGTAAAG
Azotobacter vinelandii AvOP
Avin_49570 liuR -32 5.4 GTTTACGTAAAGGTAATA
Avin_49570 liuR -38 6.3 GTTTACGTTTACGTAAAG
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Regulatory Sites [ FASTA format ] DOWNLOAD