Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Profile of regulator LiuR in Oceanospirillales/Alteromonadales

Properties
Regulator family: MerR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Regulog: LiuR - Oceanospirillales/Alteromonadales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Hahella chejuensis KCTC 2396
HCH_03687 bkdA1 -123 4.9 GTTTACGTCAACGTCACT
HCH_03687 bkdA1 -129 5.3 GCTGACGTTTACGTCAAC
HCH_03942 liuR -58 6 GTTGACGTAAACGTAAAC
HCH_03942 liuR -64 4.9 TATAACGTTGACGTAAAC
Marinobacter aqueolei
Maqu_2878 ldh -172 5.8 GTTGACGTTCACGTAAAC
Maqu_1382 bkdA1 -130 6.2 GTTTACGTTAAGGTAAAG
Maqu_2119 ivdG -83 6.3 GTTTACGTAAACGTAAAG
Maqu_2119 ivdG -89 5.2 GTTAAAGTTTACGTAAAC
Maqu_2120 liuR -46 5.2 GTTTACGTAAACTTTAAC
Maqu_2120 liuR -52 6.3 CTTTACGTTTACGTAAAC
Marinobacter sp. ELB17
MELB17_05192 paaG -121 5.5 GTTTACGTAAACGTTAGG
MELB17_06329 bkdA1 -145 5.9 CTTTACGTTAAGGTCAAC
MELB17_07894 ivdG -58 6.3 GTTTACGTAAACGTAAAG
MELB17_07894 ivdG -64 5.2 GTTAAAGTTTACGTAAAC
MELB17_07889 liuR -45 5.2 GTTTACGTAAACTTTAAC
MELB17_07889 liuR -51 6.3 CTTTACGTTTACGTAAAC
Oceanospirillum sp. MED92
MED92_06078 liuR -65 4.6 ATTGATCTTTACGTAAAC
MED92_06108 ivdA -46 5.7 GTTGACGTTTACGTCAAC
MED92_12069 aacS -108 5.7 GTTTCCGTTTACGTAAAC
MED92_06078 liuR -59 6 CTTTACGTAAACGTCAAC
Reinekea sp. MED297
MED297_07476 mmgB -79 5.2 GTTAACGTAAACGAAAAC
MED297_07476 mmgB -85 6.2 GTTGACGTTAACGTAAAC
MED297_19182 liuA -60 4.9 GTTTACGTCAACGTCACT
MED297_19182 liuA -66 5.7 GTTGACGTTTACGTCAAC
MED297_07471 liuR -99 6.2 GTTTACGTTAACGTCAAC
MED297_07471 liuR -105 5.2 GTTTTCGTTTACGTTAAC
Alcanivorax borkumensis SK2
ABO_1713 fabG -16 5.1 GTTTACCCTAAGGTAAAT
ABO_1241 liuR -36 6.5 CTTTACGTTAACGTAAAC
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Regulatory Sites [ FASTA format ] DOWNLOAD