Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Profile of regulator LexA in Rhodobacterales

Properties
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Rhodobacterales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Rhodobacter sphaeroides 2.4.1
RSP_0452 recA -64 1.1 GAACATAGGGCGAAC
RSP_2092 uvrD -56 0.7 GAACGATTGCGGAAC
RSP_1458 imuB -20 0.6 GAACGAAACAGGAAC
RSP_0556 ruvC -48 5 GTTCCCGCTTCGTGC
RSP_2966 uvrA -92 4.8 GTTCATACTATGTTC
RSP_2123 PF04055 -27 4.9 GTTCCCTTTGCGTTC
RSP_0452 recA -92 5 GTTCGCCTTATGATC
RSP_0751 PF06319 10 4.5 GTTCCCTGTCCGTTC
Paracoccus denitrificans PD1222
Pden_4289 imuA -56 0.7 GAACAAATCAGGAAC
Pden_2142 lexA -47 1.4 GAACAATCAACGAAC
Pden_0597 recA -77 1 GAACAACCCGTGAAC
Pden_0696 ruvC -44 5.1 GTTCGCCTTTCGTGC
Pden_2252 uvrA -81 4.7 GTTCCTGTGATGTTC
Pden_3951 PF04055 -27 4.8 GTTCTCTAAATGTTC
Pden_1550 PF06319 -26 4.8 GTTTCCGTTTCGTTC
Jannaschia sp. CCS1
Jann_2777 uvrD -56 1.5 GAACAATCTGCGAAC
Jann_1560 imuA 10 0.8 GAACAAATAGGGAAC
Jann_1874 lexA -77 1.3 GAACATACCCTGAAC
Jann_1986 recA -98 0.6 GAACAAGACAAGAAC
Jann_0964 ruvC 2 5.2 GTTCGCGTTTCGTGC
Jann_1723 uvrA -82 4.5 GTTCCTGAAACGTTC
Jann_2549 PF04055 -9 4.7 GTTCTTCAAATGTTC
Jann_1986 recA -127 4.9 GTTCTTGTTTTGTTT
Jann_3406 PF06319 -26 5 GTTCACCTATTGTTC
Rhodobacterales bacterium HTCC2654
RB2654_12554 dnaE2 -28 0.3 GAACAAAACGTGAAT
RB2654_21543 uvrD -111 1.3 GAACATACCCTGAAC
RB2654_16956 imuB -37 1.7 GAACATTAAGTGAAC
RB2654_04726 lexA -83 -0.4 ACACGAAACGAGAAC
RB2654_03904 recA -56 1 GAACAAGAGGCGAAC
RB2654_05712 ruvC -62 5.2 GTTCGCGTTTCGTGC
RB2654_04776 uvrA -81 4.9 GTTCACACTTCGTTC
RB2654_02045 PF04055 -20 4.5 GTTCTACTAATGTTC
RB2654_05485 PF06319 -26 4.8 GTTCACGAATTGTTC
Oceanicola granulosus HTCC2516
OG2516_00125 uvrD -57 -0.1 GAACAGAGCGGGAAC
OG2516_00284 imuA -40 0.8 GAACAAATGAAGAAC
OG2516_03218 lexA -70 -0.5 ACACAAAACGGGAAC
OG2516_04603 recA -63 1 GAACAAGAGGCGAAC
OG2516_07702 ruvC -50 4.9 GTTCGCTGTTTGTGC
OG2516_01124 uvrA -80 5.2 GTTCGCGCTATGTTC
OG2516_06172 PF04055 -30 5.4 GTTCTTCTTTTGTTC
OG2516_04603 recA -91 5 GTTCTCTTTTTGGTC
OG2516_05778 PF06319 -27 4.9 GTTTCCCTTTTGTTC
Loktanella vestfoldensis SKA53
SKA53_07341 uvrD -55 0.8 GAACGGAAGTAGAAC
SKA53_09714 imuA -59 1 GAACAAAGCATGAAC
SKA53_02996 lexA -32 0 GAACATAAGCAAAAC
SKA53_02996 lexA -54 -0.4 ACACAAAAGGGGAAC
SKA53_03339 recA -64 1.3 GAACATAAGGCGAAC
SKA53_08611 ruvC -49 5.3 GTTCGCCTTTTGTGC
SKA53_02831 uvrA -78 4.1 GTTCTATGAATGTTC
SKA53_03339 recA -91 4.9 GTTCATGTTTTGATC
SKA53_02001 PF06319 -26 5 GTTCACCTATTGTTC
Oceanicola batsensis HTCC2597
OB2597_14496 dnaE2 -48 0.3 GAACAAAACGTGAAT
OB2597_10771 imuB -27 1.4 GAACGTAAAAGGAAC
OB2597_01402 lexA -63 0.4 ACACAAAACATGAAC
OB2597_01672 recA -68 1 GAACAAGAGGCGAAC
OB2597_15620 ruvC -61 4.7 GTTCACTATTCGTGC
OB2597_01212 uvrA -80 4.8 GTTCGCGCAATGTTC
OB2597_03227 PF04055 -27 5 GTTCTCTTAATGTTC
OB2597_01672 recA -91 4.9 GTTCTTCTTTTGGTC
OB2597_02052 PF06319 -26 4.6 GTTCACTAAATGTTC
Roseovarius nubinhibens ISM
ISM_13365 uvrD -56 0.4 GAACAATCGCGGAAC
ISM_14765 lexA -58 -0.5 ACACAAAACGAGAAC
ISM_14955 recA -90 0.7 GAACAGCACGCGAAC
ISM_03450 ruvC -60 5.2 GTTCTTGTTTCGTGC
ISM_10865 uvrA -77 4.9 GTTCACAGTTTGTTC
ISM_13455 PF04055 -27 5.1 GTTCGCGGTTTGTTC
ISM_14955 recA -118 5.3 GTTCTCATTTTGTGC
ISM_00090 PF06319 -26 5.1 GTTCCCGCTTCGTTC
Roseovarius sp. 217
ROS217_05784 dnaE2 -46 0.6 GAACAAAACTGGAAC
ROS217_21917 uvrD -56 0.8 GAACAATCCCCGAAC
ROS217_11166 imuB -24 0.8 GAACAAATAGAGAAC
ROS217_21392 lexA -58 -0.5 ACACAAAACGGGAAC
ROS217_20887 recA -66 1 GAACAAGAGGCGAAC
ROS217_22507 ruvC -51 5.2 GTTCCCGTTTCGTGC
ROS217_19127 uvrA -82 4.9 GTTCGCGCTCTGTTC
ROS217_19572 PF04055 6 5.1 GTTCTCTATATGTTC
ROS217_20887 recA -94 4.9 GTTCTCTCTTTGTCC
ROS217_03665 PF06319 -26 5 GTTCGTGGTTTGTTC
Sulfitobacter sp. EE-36
EE36_13253 umuD -154 1.4 GAACACATAGAGAAC
EE36_17037 uvrD -55 2.1 GAACATTTTGCGAAC
EE36_16202 lexA -56 -0.3 ACACAAAACAGGAAC
EE36_14243 recA -82 1.1 GAACATAGAAAGAAC
EE36_09705 ruvC -56 5.2 GTTCGCGTTTCGTGC
EE36_13533 uvrA -78 5.1 GTTCCCCTTGTGTTC
EE36_15677 PF04055 -27 5 GTTCCTAATTTGTTC
EE36_14243 recA -104 5.1 GTTCTCATTTTGATC
EE36_02883 PF06319 -26 4.7 GTTCATGAATTGTTC
EE36_16347 radA -29 4.7 GTTTCCCCTTTGTTC
Silicibacter TM1040
TM1040_2024 uvrD -57 0.7 GAACGGAGCGTGAAC
TM1040_1135 lexA -58 -0.5 ACACAAAACGGGAAC
TM1040_1230 recA -72 0.5 GAACAAGAGGAGAAC
TM1040_1135 lexA -83 4.6 GTTCCCCTTATGACC
TM1040_2373 ruvC 4 5.4 GTTCGCGTTTTGTGC
TM1040_1098 uvrA -77 4.9 GTTCCCCCTCTGTTC
TM1040_1469 PF04055 -39 5.2 GTTCTTTATTTGTTC
TM1040_1230 recA -94 4.8 GTTCTTGTTTTGACC
TM1040_2122 PF06319 -170 4.7 GTTCACTAATTGTTC
Silicibacter pomeroyi DSS-3
SPO2034 recA -87 1.2 GAACAAGAGGTGAAC
SPO1174 uvrD -113 1.1 GAACAAGCCGTGAAC
SPO2154 lexA -59 -0.3 ACACAAAACAAGAAC
SPO3117 ruvC -60 5.1 GTTCCCCTTTCGTGC
SPO2218 uvrA -81 5.2 GTTCTCTTTACGTTC
SPO2034 recA -109 5.1 GTTCTCTTTTTGATC
SPO1766 PF06319 -20 5 GTTCACCTATTGTTC
Roseobacter sp. MED193
MED193_12418 umuD -30 0.2 GAACAAAGGCAGAAC
MED193_07538 uvrD -57 1.3 GAACAGAATGCGAAC
MED193_03687 lexA -47 1.5 GAACATGAATAGAAC
MED193_03687 lexA -58 -0.5 ACACAAAACGGGAAC
MED193_09210 ruvC -64 5.3 GTTCGCCTTTTGTGC
MED193_03447 uvrA -117 4.8 GTTCTTCTAACGTTC
MED193_22781 PF04055 -39 5.2 GTTCTTCATTTGTTC
MED193_04366 recA -93 4.8 GTTCTCCTTTTGACC
MED193_08438 PF06319 -26 5.2 GTTCTCTTATTGTTC
MED193_12443 umuD -44 5.1 GTTCACTTTATGTTC
Hyphomonas neptunium ATCC 15444
HNE_2938 uvrD -138 -0.9 GAAAAAAGCGCAAAC
HNE_2464 imuA -17 1.2 GAACAAAATAAGAAC
HNE_2765 uvrA -95 5.3 GTTCACATTTTGTTC
HNE_1903 PF04055 -100 5.3 GTTCTTGCTTTGTTC
HNE_2742 recA -128 4.6 GTTTCTGCTTTGTTC
HNE_0511 rmuC -41 4.6 GTTCCGATTATGTTC
HNE_0720 radA -294 4.3 GTCCATTTTTCGTTC
Oceanicaulis alexandrii HTCC2633
OA2633_04776 recA -68 1.5 GAACAAAATAAGTAC
OA2633_07399 ruvC -38 4.9 GGTCGCGTTTTGTTC
OA2633_04146 uvrA -187 4.7 GTTCACATTCCGTTC
OA2633_14191 PF04055 -9 5.1 GTTCTTGATATGTTC
OA2633_04776 recA -86 4.8 GTTCCTGTTGCGTTC
OA2633_12765 rmuC -37 4.7 GGTCCCGTTTCGTTC
OA2633_02671 lexA -27 4.7 GTTTCTATTTTGTTC
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Regulatory Sites [ FASTA format ] DOWNLOAD