Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Profile of regulator NtrC in Various betaproteobacteria

Properties
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Regulog: NtrC - Various betaproteobacteria
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Azoarcus sp. EbN1
ebA4116 ntrC -23 5.3 CGCACCAAAAAAGTGCA
ebA3154 CHP02001 20 5 CGCACCGTTCCGGTGCA
ebA4121 glnA -253 5.5 TGCACCATGATGGTGCG
ebA4609 amtB2 -159 5.2 CGCACCGTAATTGTGCA
ebA2252 gltB -96 5.2 TGCACAGTTTTGGTGCG
Thauera sp. MZ1T
Tmz1t_0595 CHP02001 -175 5.4 CGCACCACATTGGTGCG
Tmz1t_3651 ntrC -23 5.4 CGCACCAGAATAGTGCA
Tmz1t_3648 glnA -196 5.1 CGCACCATTGAAGTGCA
Tmz1t_3648 glnA -228 5.5 CGCACCATAGTAGTGCA
Tmz1t_0457 amtB2 -115 4.5 CGCACCCCTCTGGTGCG
Tmz1t_0457 amtB2 -49 4.4 CGCACTGGAACGGTGCT
Tmz1t_0842 gltB -141 5.7 TGCACCAGATTGGTGCA
Tmz1t_1142 nasD -290 4.3 CGCACCAGGGCTGTGCA
Tmz1t_1142 nasD -258 4.7 TGCACCGCAGCAGTGCG
Dechloromonas aromatica RCB
Daro_3763 glnA -214 5.7 TGCACCAAAATAGTGCG
Daro_0052 CHP02001 -148 5 CGCACAGTTTTGGTGCG
Daro_3763 glnA -183 5 TGCACGATCGTGGTGCA
Daro_3703 amtB2 -119 4.9 TGCACCAAACAGGTGCT
Daro_3703 amtB2 -53 4.8 TGCACTGGAATGGTGCT
Daro_0816 nasD -199 5.3 TGCACGAATTTGGTGCG
Daro_3759 ntrB -204 5.6 TGCACCAATACGGTGCG
Thiobacillus denitrificans
Tbd_2503 glnA -188 4.3 CGCCCTATAATGGAGCG
Tbd_2503 glnA -220 5 TGCACCAAGACGGGGCA
Tbd_1701 amtB2 -114 4.3 CGCACTTCGGCGGTGCA
Tbd_2310 nasA -138 4.4 CGCACCAATTTGCGGCG
Chromobacterium violaceum ATCC 12472
CV3591 ntrB -118 6 TGCACCAAAATGGTGCA
CV4002 glnK -176 5.2 TGCACCAAAACCGTGCA
CV3589 glnA -202 5.2 GGCACCATATCGGTGCA
CV3589 glnA -172 4.7 GGCACCAGAATGGTTCA
Laribacter hongkongensis HLHK9
LHK_01876 glnA -226 5.4 TTCACCATTTTGGTGCA
LHK_01876 glnA -255 5.1 TGCACCATTGATGTGCA
Methylobacillus flagellatus KT
Mfla_0433 glnK -188 5.3 TGAACTATTTTGGTGCA
Mfla_2447 glnA -189 5.6 AGCACCAATATGGTGCA
Mfla_2447 glnA -158 4.9 CGCAATATAGTGGTGCA
Mfla_0433 glnK -206 5.1 TGCACATCATTGGTGCA
Methylotenera mobilis JLW8
Mmol_2138 glnA -153 5 TGCATTGTATTGGTGCA
Mmol_2140 ntrB -268 5.7 TGCACCTAAATGGTGCA
Mmol_2140 ntrB -9 4.9 AGCACTATTATGGTTCA
Mmol_2138 glnA -183 5.3 TGCACCAAAAATGTGCA
Mmol_2289 CHP02001 -288 4.7 CGCCCTTTAATAGTGCA
Mmol_1494 amtB2 -152 5.1 TGCACATATTTAGTGCA
Mmol_1494 amtB2 -122 5.1 TGCACAATGTTAGTGCA
Mmol_1652 nasD -219 4.3 TGCACCAAAGTAGTAAA
Methylophilales bacterium HTCC2181
MB2181_01245 CHP02001 -282 4.7 TGCCCTGAAGTAGTGCA
MB2181_03520 amtB2 -134 5.3 TGCACCAAAATAATGCA
MB2181_01610 glnA -173 5.5 TGCACTAAATTAGTGCG
MB2181_01610 glnA -141 4.4 AGCATTTAATTGGTGCA
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Regulatory Sites [ FASTA format ] DOWNLOAD