Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Profile of regulator NtrC in Oceanospirillales/Alteromonadales

Properties
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Regulog: NtrC - Oceanospirillales/Alteromonadales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Hahella chejuensis KCTC 2396
HCH_06398 glnK -193 4.7 TGCGCTATAATTGTGCC
HCH_06398 glnK -265 5.1 TGCACAAAATTTGTGCA
HCH_01036 glnA -287 5.1 GGCACCAACTTGGTGCA
HCH_01034 ntrB -241 4.8 CGCACCAAAAAAGAGCA
HCH_04519 urtA -256 4.7 TGCACCGCTTTGGTTCA
Marinobacter aqueolei
Maqu_0523 glnK -208 5.2 TGCACCACAACAGTGCA
Maqu_0769 glnA -297 4.9 TGCACCATAATTATGCG
Maqu_0769 glnA -267 5.4 TGCACCACGATGGTGCA
Maqu_0769 glnA -254 5 TGCACTGCAGTGGTGCA
Maqu_0767 ntrB -211 5.2 CGCACCACCATGGTGCA
Maqu_3001 urtA -146 4.5 CGCACCAATTCATTGCA
Maqu_3001 urtA -201 4.5 TGCACCAATTGAGGGCG
Marinobacter sp. ELB17
MELB17_20756 glnK -208 5.3 CGCGCTATTATGGTGCA
MELB17_20021 glnA -292 5.2 CGCACAAATGTGGTGCA
MELB17_20031 ntrB -253 5 AGCACTATTTTGGTGCC
MELB17_05409 urtA -210 4.3 TGCACCAACTGTGAGCA
Oceanobacter sp. RED65
RED65_16381 glnA -245 5.2 TGCACTTTTATGGTGCG
RED65_16381 glnA -215 4.4 TGCACAACCTGAGTGCA
RED65_16396 ntrB -240 5.3 CGCACTATTTTGGTGCT
RED65_07204 ureD -65 4.8 TGCACCTTCGTGGTGCG
RED65_07244 PF09694 -245 4.3 TGCAACAAAATAGAGCT
RED65_07244 PF09694 -316 4.3 TGTTCTATTTTGGTGCT
Oceanospirillum sp. MED92
MED92_00650 glnA -209 5.4 TGCTCTATTTTGGTGCA
MED92_00650 glnA -178 5.4 TGCTCTATTTTGGTGCA
MED92_00655 ntrB -148 5.3 TGCACTGTTTTGGTGCG
MED92_06736 glnK -222 5.5 AGCACCAAATTGGTGCA
MED92_06736 glnK -180 4.3 CGCCCCATTTTATTGCA
Marinomonas sp. MWYL1
Mmwyl1_0735 ntrB -74 5.4 TGCACTATAATTGTGCA
Mmwyl1_0736 glnA -252 4.3 CGCACCAACATGGAACA
Mmwyl1_0736 glnA -221 4.8 TGATCTAAAATGGTGCA
Mmwyl1_3656 glnK -208 4.5 CGCACCAAGTTAACGCA
Saccharophagus degradans 2-40
Sde_0502 glnA -273 5.1 CGCACCACTTCAGTGCA
Sde_0500 ntrB -307 4.9 CGCACCATATTGAAGCA
Sde_0218 ureD -160 4.5 TGCACAATAATGGTGTT
Sde_0218 ureD -137 4.4 CGCGCCCACTTGGTGCG
Sde_0231 PF09694 -193 5.1 TGCACCATATTTGTGCC
Teredinibacter turnerae T7901
TERTU_4421 glnA -263 4.3 GGCGCCACACTGGTGCA
TERTU_4421 glnA -234 5.1 CGCACCACTATGGCGCG
TERTU_4423 ntrB -344 4.8 AGCACCATTACAGCGCA
TERTU_4209 ureD -29 4.9 TGCGTTAATATGGTGCA
TERTU_4200 urtA -215 4.6 GGCACCTTAATGGTGCC
TERTU_4186 PF09694 -186 4.6 TGCACTCATATTGTGCT
Cellvibrio japonicus Ueda107
CJA_3534 glnA -288 5 CGCACCAATACAGTGCT
CJA_3536 ntrB -152 5.4 AGCACCAAAATAGTGCA
CJA_3392 glnK -241 4.9 TGCTTCATTTTGGTGCG
Chromohalobacter salexigens DSM 3043
Csal_3161 glnK -191 5.2 TGCGCCATGTTGGTGCA
Csal_0243 glnA -303 5.3 TGCACCCAAATGGTGCA
Csal_0243 glnA -272 4.3 TGCACCTTCATGATGCT
Csal_0245 ntrB -98 5.7 TGCACTAATTTGGTGCA
Csal_2313 urtA -162 4.9 TGCGCCATTTAGGTGCG
Csal_2313 urtA -225 4.4 TGCACTTTTCTGGTGCT
Reinekea sp. MED297
MED297_10311 glnK -332 4.8 CGCACCTATACGGTGCG
MED297_10311 glnK -314 4.3 CGCCCTAAACTGGTGCG
MED297_12572 glnA -245 4.9 CGCACCAAAACAGCGCA
MED297_12572 glnA -232 4.8 CGCACTTAGTTGGTGCA
MED297_03707 ntrB -217 5.3 TGCACTATAATAGTGCT
Alcanivorax borkumensis SK2
ABO_2530 glnK -213 5 TGCCCCATTGTGGTGCG
ABO_2530 glnK -200 4.9 TGCGCTATAATGGCGCG
ABO_1930 PF09694 -195 5.2 CGCACCATTGCGGTGCA
ABO_2262 glnA -242 5.2 TGCACTATTTTAGTGCC
ABO_2262 glnA -211 4.5 TGCACTGCATCTGTGCA
ABO_2260 ntrB -138 5.3 TGCACCCATATGGTGCA
ABO_2722 ureD -47 5 TGCATAAATTTGGTGCA
Export
Regulatory Sites [ FASTA format ] DOWNLOAD