Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Profile of regulator NtrC in Alteromonadales

Properties
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Regulog: NtrC - Alteromonadales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Pseudoalteromonas atlantica T6c
Patl_0491 glnK -178 4.9 TGCGCTAATTCGGTGCA
Patl_1025 glnA -191 4.3 TGCATGGTAATGGTGCG
Patl_1027 ntrB -35 5.6 AGCACCAAAATGGTGCG
Alteromonas macleodii 'Deep ecotype'
MADE_00479 glnK -162 5.3 TGCACCATTGTTGTGCA
MADE_01591 glnA -162 5.5 TGCACATTTTTGGTGCA
MADE_01589 ntrB -33 5.6 TGCACAATAATGGTGCA
Glaciecola sp. HTCC2999
GHTCC_010100001884 glnK -170 5.1 TGCACTTATTAAGTGCA
GHTCC_010100001110 glnA -196 5.6 TGCACCTATTTGGTGCT
GHTCC_010100001115 ntrB -28 5.7 CGCACCTTTTTGGTGCA
Colwellia psychrerythraea 34H
CPS_0641 glnK -139 4.4 TGCACGCTCTTGGTGCG
CPS_0400 glnA -203 5.1 AGCACCACTAAGGTGCA
CPS_0398 ntrB -42 5.5 CGCACCAAAACGGTGCA
Alteromonadales bacterium TW-7
ATW7_10498 glnK -141 5.6 CGCACCTAAATGGTGCG
ATW7_15216 ntrB -20 5.6 CGCACTAAAATGGTGCA
ATW7_15206 glnA -151 5.6 CGCACCATATTGGTGCT
Pseudoalteromonas haloplanktis TAC125
PSHAa2258 glnK -139 5.7 CGCACCTAATTGGTGCG
PSHAa0164 ntrB -20 5.6 CGCACTAAAATGGTGCA
PSHAa0166 glnA -150 5.7 CGCACCATAATGGTGCG
Pseudoalteromonas tunicata D2
PTD2_12849 glnK -142 5.6 TGCACAAATATGGTGCG
PTD2_06404 ntrB -20 5.6 CGCACTAAAATGGTGCA
PTD2_06414 glnA -180 5.5 TGCACCAAATCTGTGCA
Idiomarina baltica OS145
OS145_08983 ntrB -39 5.8 TGCACCAAATTAGTGCA
OS145_08988 glnA -222 5.5 TGAACCAAATTGGTGCA
Idiomarina loihiensis L2TR
IL2164 glnK -124 5 CGCACGTTTTTTGTGCA
IL2436 ntrB 14 5.6 TGCACCAACTTGGTGCG
IL2437 glnA -158 5.7 TGCACCAATTTTGTGCG
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Regulatory Sites [ FASTA format ] DOWNLOAD