Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Profile of regulator IscR in Rhodobacterales

Properties
Regulator family: Rrf2
Regulation mode: repressor (activator)
Biological process: Iron-sulfur cluster biogenesis; Iron homeostasis
Effector: Iron-sulfur cluster redox state; Iron ion, (Fe2+)
Regulog: IscR - Rhodobacterales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Rhodobacter sphaeroides 2.4.1
RSP_3416 fecB -142 4.6 TCCGACTGTTCTTGTCGGA
RSP_0920 exbB -134 4 CTTGACTGTTTTCGTAAAC
RSP_6006 hemP -228 3.9 ACCGACCGAAAGAATCAGC
RSP_6006 hemP -200 4.7 TCCGACTGATTCAGTCACC
RSP_1545 COG3488 -56 4.4 TCCGATTGAAAGACTCGGG
RSP_0443 iscR -119 4.3 CTTGACAAAAACGCTCGGA
RSP_3417 RSP_3417 -204 4.6 TCCGACAAGAACAGTCGGA
RSP_2913 fbpA -20 3.7 CCTGACAAAAGAGGTCACA
RSP_2913 fbpA -80 4.5 GTTGACTGATAGACTCAGC
RSP_4275 fecI -70 4.3 GCCGAGCGATATTGTCGGG
Paracoccus denitrificans PD1222
Pden_3522 fecB -128 4.1 TCCTATTCTTTTTGTCGGA
Pden_1139 fhuA 24 4.3 CCTGAGTTAATAGCTCGGA
Pden_4201 hmuR -89 4.1 ATTGACAGTTTTACTAAGA
Pden_1138 araX -81 3.8 CCAGAGTTTTTCAATCAAC
Pden_4141 hemP -53 4.3 TCCTAGGAAATTTGTCAGG
Pden_3521 RSP_3417 -164 4.1 TCCGACAAAAAGAATAGGA
Jannaschia sp. CCS1
Jann_3277 null -31 4.8 CCTGAGTAATACACTCAAG
Jann_3275 hemP -259 4.4 GCATACTATTTTAGTCAGG
Jann_3275 hemP -287 5.2 TCTGAGTAAAATACTCAGG
Jann_2132 hmuR -144 4.4 GTTGACGCTTTTAGTCGGA
Jann_2366 iscR -127 3 GATTCCAAATTGTGTCGGG
Jann_1208 fbpC -27 4 CCCGATTGAAAAGATCGGA
Jann_1368 irpA -253 4.7 TCTGACAAAACAAGTCAGG
Jann_0134 fbpB -21 3.8 CCCGACAAAAACACCAAGA
Jann_2122 fecB -36 5.1 TCTGACTAAAATACTCAAC
Jann_2122 fecB -61 4.4 TCTAACTATTTCTGTCAGC
Jann_2123 fecC -59 5.1 GTTGAGTATTTTAGTCAGA
Jann_2123 fecC -34 4.4 GCTGACAGAAATAGTTAGA
Jann_0118 fbpA -37 5.3 CCTGACTGTTTTAGTCGGA
Jann_0118 fbpA -94 3.7 TCAAAGTGTTTTTGTCGGA
Rhodobacterales bacterium HTCC2654
RB2654_09499 fecC -87 4.7 GTTGAGTGTTTCAGTCGGA
RB2654_09499 fecC -54 4.9 ATTGACTAAATCAGTCGGG
RB2654_15781 hmuR -112 4.6 GTTGACTAAATTACTAAGC
RB2654_13154 irpA -25 3.9 CCCGATCACTTTACTCGGG
RB2654_08847 null -91 5.2 TCCGACTGAATTTGTCAGA
RB2654_09494 fecB -67 4.9 CCCGACTGATTTAGTCAAT
RB2654_09494 fecB -34 4.7 TCCGACTGAAACACTCAAC
RB2654_04329 fbpA -52 5.2 CCTGACGAATTTAGTCAGA
Oceanicola granulosus HTCC2516
OG2516_02803 fbpC -44 3.6 CCCGAGCGAAATGTTCGGG
OG2516_03503 fbpA -58 4.9 CCCGACCAAAATAGTCAGC
Loktanella vestfoldensis SKA53
SKA53_15396 null -45 4.8 CCTGATTATTTATGTCAGG
SKA53_02241 fbpB -72 4.6 TCCGATCAAATAAGTCAGA
SKA53_06277 null -33 5.1 GCTGACTATATTTGTCGGG
SKA53_06267 hemP -47 4.8 GCTGACAGAAATAATCAGA
SKA53_06417 hmuR -113 4.6 CTTGACTGTTTGTGTCGGA
SKA53_14131 hemP -43 5.1 CCTGACTAAAAAACTCAGG
SKA53_05183 iscR -131 4.2 CTTGACGAAAACTATCAGG
SKA53_06010 fbpC -29 3.6 CCCAATTGTTTTGATCAGG
SKA53_05313 fbpA -53 4.1 CCCAAGTAAAAGAGTCGGG
SKA53_05313 fbpA -78 4.8 CCCGACTAAAATATTCAGG
Oceanicola batsensis HTCC2597
OB2597_09404 fecB -123 3.8 CCCGCCCAAAACTGTCGGG
OB2597_09404 fecB -154 4.2 ATCGACTGTTTTTGTCGGT
OB2597_05425 hemP -192 4.7 CTTGACTAATTTGATCGGA
OB2597_05425 hemP -149 3.9 TCCGAGTCGAATGCTCGGA
OB2597_05460 OB2597_05460 -101 4.2 TCTGACGGTTTTTATCAAC
OB2597_08064 ISM_05670 -166 4.7 TCCGACTGATATAGTCACC
OB2597_06825 null -125 4.1 GTTGATCGAAAAAGTCGGA
OB2597_06825 null -97 4.3 GGTGAGCAAAATAGTCAGG
OB2597_03589 iscR -134 3.8 CTTGACGACTTTGGTCAAG
OB2597_00425 fbpC -26 4.1 CCTTAGTAAATCCATCGGA
OB2597_09409 RSP_3417 -390 4.4 CATGATTGTTTCAGTCGGA
OB2597_09409 RSP_3417 -318 3.8 CCCGACAGTTTTGGGCGGG
OB2597_09409 RSP_3417 -287 4.2 ACCGACAAAAACAGTCGAT
OB2597_04193 fbpA -60 4.9 CCTGACCAAAATACTCGGA
Roseovarius nubinhibens ISM
ISM_15940 SKA53_15391 -81 4.9 TCCGACTCTTTTTGTCAGA
ISM_05670 ISM_05670 -100 4.1 CTTGACTTTTTGCCTCAGG
ISM_00940 OB2597_05460 -117 4.9 CCTGAGTAAAAGACTCAGG
ISM_04265 Mlr1156 -132 4 TCCGACTATTTCATTTAGG
ISM_04235 hmuR -157 4.4 CTTGACAGTTTTAGTCTGA
ISM_01000 hemP -205 5.2 TCTGACTAAAAAAGTCGGA
ISM_01000 hemP -178 4.8 TCTGACAGAATAAATCAGA
ISM_04365 irpA -82 4.9 CCCGAGTATTTCACTCAGG
ISM_15910 fbpC -46 4.5 CCCGAGTGAATTGATCGGA
ISM_05125 fbpA -104 5.2 TCCGAGTATTTTAGTCGGA
ISM_05125 fbpA -138 5.4 CTTGACTAAATTAGTCGGA
Roseovarius sp. 217
ROS217_22877 araX -165 4.1 CCTGATGTAATTTGTCAAC
ROS217_17442 hmuR -198 4.4 CTTGACTCTTTTACTCATA
ROS217_22882 fhuA -30 4.7 CCTGAGTTAAAGAGTCGGA
ROS217_23865 hemP -152 4.2 TCTGATCAAAAGAATCGGA
ROS217_23865 hemP -124 4.7 CCTTATTAATTAAGTCAGA
ROS217_10107 irpA -147 4.6 GCCTACTAAATCAGTCAAC
ROS217_20542 iscR -120 3.5 CTTGACGACTTCGCTCGGG
ROS217_20592 fbpC -36 4.1 CCCGATAGATTTGATCGGA
ROS217_23057 fbpA -38 3.8 CCCCATCAAATCACTCGGA
ROS217_23057 fbpA -70 4.8 ATTGACTCTTTTAGTCAGA
Sulfitobacter sp. EE-36
EE36_01780 fhuA2 -30 4.9 TCCGACTAAAACAGTAAGG
EE36_01780 fhuA2 -251 3.8 TCTTACTTTATTTATAGGG
EE36_10454 EE36_10454 -82 4.3 CTTGATTGTTTTTATCAGC
EE36_01780 fhuA2 -72 3.7 CCTTACTATTTCAGTTTGA
EE36_01535 hmuR -256 4.3 GTTGACACTTTTAGTCGGT
EE36_12993 Mlr1156 -167 4.4 GTTGATTGTTAAAGTCAGG
EE36_08018 araX -113 5.2 TCCGAGTAAATTTGTCAGA
EE36_08023 fhuA -44 4.6 ACTGAGTTAAATACTCGGA
EE36_14302 iscR -136 3.6 GTTGACGAATTCGCTAGGG
EE36_10464 hemP -274 5 TCCGACTAAAACTGTCGGA
EE36_10464 hemP -247 4.1 CCCTATAATTTCAATCAGG
EE36_02713 irpA -140 4.8 TCTTACTAAAATTGTCGGG
EE36_16412 fbpC -32 4.1 CCCGAGCGAATTGATCGGA
EE36_05618 fbpB -28 5.1 TCCGACTGAATTAGTCGAA
EE36_05613 fbpA -91 4.4 TCCTATTAATTCACTCAAG
EE36_05613 fbpA -42 3.7 TCTTACTGTTTTTATAGGT
Silicibacter TM1040
TM1040_2633 TM1040_2633 -116 4.5 TCCGACAAAAATACTAGGG
TM1040_0347 hmuR -143 3.9 CTTGACAGATTTAATAAAT
TM1040_1240 iscR -137 3.9 CTTGACGAATTTTATCCGG
TM1040_2198 hemP -258 4.7 TCTGACCAAATAAATCAGG
TM1040_2200 bfd -103 4.1 CCTGATCAAAACAGTCCGA
TM1040_2200 bfd -71 4.2 GCTTATTCTTTTACTCGGA
TM1040_0122 fbpB -50 3.7 TCCGACAAAAATGCTTGAA
TM1040_0124 fbpA -126 5 TCTGACTGAATTTATCGGA
Silicibacter pomeroyi DSS-3
SPO2025 iscR -141 4.1 CTTGACGAATTCCCTCGGG
SPO0086 irpA -88 5.2 ACTGACAAATTTAGTCAGA
SPO0789 hemP -99 4.6 GGCGACAAAAATAGTCAGG
SPO3288 fbpB -27 4.1 TCCGACTAAACTGGTCGAT
SPO3287 fbpA -50 4.7 CCCGACTGAAATAATCAGT
Roseobacter sp. MED193
MED193_17504 hmuR 69 4 GTTGACTGTTTTTATCACC
MED193_15812 TM1040_2633 -139 5.3 TCTGACTATTTTTGTCAGA
MED193_04321 iscR -144 4 CTTGACGAATTCCATCAGC
MED193_19679 MED193_19679 -118 5.3 TCTGACAAAAATAGTCAGA
MED193_19679 MED193_19679 -91 4.7 CTTGATTGTTTTAATCAGG
MED193_19654 bfd -103 4.4 CCTGACAAAAACAATAAGC
MED193_19654 bfd -72 4.5 CCTTATTGTTTTTGTCAGA
MED193_12813 fbpB -58 3.8 TCCGACCAAAATGATCGCA
MED193_12793 fbpA -65 4.2 ACTGACAAAAGAAGTCGGA
MED193_22076 fecB -355 4 CTTGACAAAACCTGTAAGG
Oceanicaulis alexandrii HTCC2633
OA2633_03081 dps -247 4.1 TCCGTGTGTATCAATCAGG
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Regulatory Sites [ FASTA format ] DOWNLOAD