Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Profile of regulator PrpR in Alteromonadales

Properties
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Methylcitrate utilization
Effector: 2-methylcitrate
Regulog: PrpR - Alteromonadales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Pseudoalteromonas atlantica T6c
Patl_1418 prpR -116 5.4 ATTGTCGACAAC
Patl_1418 prpR -168 5.8 ATTGTCGACAAT
Alteromonas macleodii 'Deep ecotype'
MADE_03369 prpR -87 5.4 GTTGTCGACAAT
MADE_03369 prpR -34 5.3 ATTGTCGACATT
Glaciecola sp. HTCC2999
GHTCC_010100001200 prpR -91 5.4 GTTGTCGACAAT
GHTCC_010100001200 prpR -39 5.8 ATTGTCGACAAT
Colwellia psychrerythraea 34H
CPS_4800 acnB -142 5.3 AGTGTCGACAAT
CPS_4800 acnB -292 4.4 ATTTCCGACAAT
CPS_2823 prpR -69 5.1 TTTGTCGACAAT
CPS_2823 prpR -141 5.8 ATTGTCGACAAT
CPS_2159 MADE_03684 -162 4.2 CTTGTTAACAAT
CPS_0917 prpE -53 4.6 TTTGTCGACAGT
CPS_0917 prpE -265 4.6 ATTGTCGACATA
CPS_4800 acnB -27 4 AGTGTCTCCAAT
CPS_2159 MADE_03684 -93 5.8 ATTGTCGACAAT
CPS_2159 MADE_03684 -31 5.8 ATTGTCGACAAT
Alteromonadales bacterium TW-7
ATW7_14131 prpR -26 5.8 ATTGTCGACAAT
ATW7_14131 prpR -113 5.3 AGTGTCGACAAT
ATW7_14131 prpR -175 4.2 GCTGTCGACACT
Pseudoalteromonas haloplanktis TAC125
PSHAa1776 prpR -25 5.8 ATTGTCGACAAT
PSHAa1776 prpR -112 4.8 GATGTCGACAAT
PSHAa1776 prpR -175 4.4 GGTGTCGACACT
Pseudoalteromonas tunicata D2
PTD2_20517 prpR -88 5.8 ATTGTCGACAAT
PTD2_20517 prpR -21 5.1 ATTGTCGACAAA
PTD2_20517 prpR -150 4.1 ATTGTCAACATA
Idiomarina baltica OS145
OS145_00715 prpR -17 4.6 TATGTCGACAAT
OS145_00715 prpR -90 5.8 ATTGTCGACAAT
Idiomarina loihiensis L2TR
IL1428 prpR -86 5.8 ATTGTCGACAAT
IL1428 prpR -14 5.1 ACTGTCGACAAT
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Regulatory Sites [ FASTA format ] DOWNLOAD