Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Profile of regulator BirA in Oceanospirillales/Alteromonadales

Properties
Regulator family: BirA
Regulation mode: repressor
Biological process: Biotin biosynthesis
Effector: Biotin
Regulog: BirA - Oceanospirillales/Alteromonadales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Hahella chejuensis KCTC 2396
HCH_05372 COG1040 30 8.1 CTGTCAACC-(14)-GGTTAACAG
HCH_05371 bioB -164 8.1 CTGTTAACC-(14)-GGTTGACAG
Marinobacter aqueolei
Maqu_2757 COG1040 21 8.1 CTGTCAACC-(14)-GGTTAACAG
Maqu_2757 COG1040 -42 7.5 CTGTTAACC-(14)-GGTTTACGG
Maqu_2756 bioB -41 7.5 CCGTAAACC-(14)-GGTTAACAG
Maqu_2756 bioB -104 8.1 CTGTTAACC-(14)-GGTTGACAG
Marinobacter sp. ELB17
MELB17_04752 bioA -78 7 CTGTTAACT-(14)-GGTTAACAG
MELB17_06979 bioB -40 7.5 CCGTAAACC-(14)-GGTTAACAG
MELB17_06979 bioB -102 8.1 CTGTTAACC-(14)-GGTTGACAG
MELB17_06974 COG1040 21 8.1 CTGTCAACC-(14)-GGTTAACAG
MELB17_06974 COG1040 -41 7.5 CTGTTAACC-(14)-GGTTTACGG
Oceanobacter sp. RED65
RED65_04570 bioB -152 8.3 CTGTAAACC-(14)-GGTTGACTG
Marinomonas sp. MWYL1
Mmwyl1_3458 COG1040 15 8.4 CTGTCAACA-(14)-GGTTTACAA
Mmwyl1_3457 bioB -85 8.4 TTGTAAACC-(14)-TGTTGACAG
Saccharophagus degradans 2-40
Sde_3140 COG1040 -33 9 CTGTCAACC-(15)-GGTTTACAA
Sde_3139 bioB -90 9 TTGTAAACC-(15)-GGTTGACAG
Teredinibacter turnerae T7901
TERTU_0490 bioB -110 8.7 TTGTAAACT-(15)-GGTTGACAA
TERTU_0489 COG1040 -49 8.7 TTGTCAACC-(15)-AGTTTACAA
Cellvibrio japonicus Ueda107
CJA_0426 bioB -63 8.5 TAGTAAACC-(15)-GGTTGACAG
CJA_0425 COG1040 -147 8.5 CTGTCAACC-(15)-GGTTTACTA
Chromohalobacter salexigens DSM 3043
Csal_1167 bioB -46 7.3 TGGTCAACC-(14)-AGTTGACCA
Csal_1167 bioB -102 8.8 TTGTCAACC-(15)-GGTTGACAT
Reinekea sp. MED297
MED297_08751 bioB -83 6.8 ATGTAAAGT-(15)-AATTGACAA
MED297_08746 COG1040 -231 6.8 TTGTCAATT-(15)-ACTTTACAT
Alcanivorax borkumensis SK2
ABO_2221 COG1040 4 7.9 CTGTCAACC-(16)-AGTTTACTG
ABO_2220 bioB -83 7.9 CAGTAAACT-(16)-GGTTGACAG
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Regulatory Sites [ FASTA format ] DOWNLOAD