Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Profile of regulator BirA in Alteromonadales

Properties
Regulator family: BirA
Regulation mode: repressor
Biological process: Biotin biosynthesis
Effector: Biotin
Regulog: BirA - Alteromonadales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Pseudoalteromonas atlantica T6c
Patl_2558 bioA -44 7.6 TTGTCAACT-(15)-ACTTTACAA
Patl_2557 bioB -87 7.6 TTGTAAAGT-(15)-AGTTGACAA
Alteromonas macleodii 'Deep ecotype'
MADE_02211 bioB -86 6.9 TgGTAAAgg-(15)-aGTTgACAA
MADE_02212 bioA -18 6.9 TTGTcAACt-(15)-ccTTTACcA
Glaciecola sp. HTCC2999
GHTCC_010100004703 bioA -44 8.7 TTGTCAACC-(15)-AGTTTACAA
GHTCC_010100004698 bioB -92 8.7 TTGTAAACT-(15)-GGTTGACAA
Colwellia psychrerythraea 34H
CPS_2593 bioA -33 7.7 ATGTCAACG-(15)-GGTTAACAA
CPS_2594 bioB -87 7.7 TTGTTAACC-(15)-CGTTGACAT
Alteromonadales bacterium TW-7
ATW7_13078 bioA -34 8 TTGTCAACG-(16)-AGTTTACAT
ATW7_13073 bioB -95 8 ATGTAAACT-(16)-CGTTGACAA
Pseudoalteromonas haloplanktis TAC125
PSHAa1609 bioB -99 8 ATGTAAACT-(16)-CGTTGACAA
Pseudoalteromonas tunicata D2
PTD2_19562 bioA -34 7.9 TTGTCAACA-(16)-AGTTTACAT
PTD2_19567 bioB -95 7.9 ATGTAAACT-(16)-TGTTGACAA
Idiomarina baltica OS145
OS145_05987 bioA -44 6.8 CTGTCAATT-(15)-ACTTTACAA
OS145_05992 bioB -95 6.8 TTGTAAAGT-(15)-AATTGACAG
Idiomarina loihiensis L2TR
IL1324 bioB -89 6.6 TTGTAAAgt-(15)-taTTgACAg
IL1325 bioA -45 6.6 cTGTcAAta-(15)-acTTTACAA
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Regulatory Sites [ FASTA format ] DOWNLOAD