Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Profile of regulator FadP in Ralstonia

Properties
Regulator family: TetR
Regulation mode:
Biological process: Fatty acid degradation
Effector:
Regulog: FadP - Ralstonia
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Ralstonia solanacearum GMI1000
RS04423 fadP -136 5.7 TTGAACGATCGTTCGA
RSc0923 etfB -95 5.2 TAGCACGACCGTTCGT
RSc1567 etfD -120 5.6 TCGAACGACCGTTCAA
RSc0780 fadD2 -58 5.3 TAGAACGATCGTTCAG
RS02959 RSc1772 41 5 AAGAACGATCGTTCAG
RS02946 fadB -101 5.5 TTGAACGACCGTGCTA
RSc2013 paaH1 -49 4.9 TCGCACGCTCGTGCTA
RSc2857 fadD1 -47 5.2 TCGAACGACCATTCGA
RS03611 RSc2046 -63 5.5 TAGCACGACCGTTCAA
RSc1637 bktB -59 4.8 TCGAACGATCGTTTGC
RSc1749 alkK -42 4.6 TAGAACGGTTGTTCAG
Ralstonia pickettii 12J
Rpic_0347 fadP -136 5.6 TTGAACGACCGTTCGA
Rpic_0793 etfB -96 5.1 TAGCACGACCGTTCGG
Rpic_1986 etfD -121 5.2 TCGAACGATCGTTCAG
Rpic_0727 fadD2 -60 5.4 TAGAACGATCGTTCGG
Rpic_1434 RSc1772 -27 5.3 TAGAACGATCGTTCAG
Rpic_1447 fadB -141 5.5 TTGAACGACCGTGCTA
Rpic_2168 paaH1 -53 4.9 TCGCACGCTCGTGCTA
Rpic_3104 fadD1 -46 4.8 ACGAACGACCATTCGA
Rpic_2198 RSc2046 -85 5.1 GCGAACGGTCGTGCGA
Rpic_2198 RSc2046 -63 5.2 TAGCACGACCGTTCAC
Rpic_1910 bktB -59 4.7 GCGAACGGTCGTGCGT
Rpic_1455 alkK -34 4.6 TAGAACGGTTGTTCAG
Ralstonia metallidurans CH34
Rmet_0384 fadP -142 4.9 CTGAACGACCGTTCTT
Rmet_0737 etfB -48 5.5 TAGTACGATCGTTCGA
Rmet_1146 etfD -243 5.4 AAGAACGGTCGTTCAA
Rmet_2635 fadD2 -106 5.3 TAGAACGGTCGTTCAG
Rmet_1843 RSc1772 36 5.2 TCGAACGACCGTTCAG
Rmet_1855 fadB -165 5.5 TTGAACGACCGTGCTA
Rmet_1061 acsA -16 5.4 TAGAACGGTCGTTCGC
Rmet_0222 nppD -39 5.4 TCGAACGATCGTTCCA
Rmet_0102 liuR -32 5 ACGAACGATCGTTCAC
Rmet_0974 paaH1 -44 4.9 ACGTACGATCGTGCTA
Rmet_3148 fadD1 -32 4.7 TCGAACGACCATTCAG
Rmet_0943 RSc2046 -62 5.2 TAGCACGACCGTTCAC
Rmet_1362 bktB -72 4.7 AAGTACGGTCGTTCGT
Rmet_1863 alkK -73 4.6 TAGCACGATTGTTCGT
Ralstonia eutropha JMP134
Reut_A0445 fadP -140 4.9 CTGAACGACCGTTCTT
Reut_A2550 etfB -97 5.5 TAGTACGATCGTTCGA
Reut_A1262 etfD -211 5.1 AAGAACGACCGTTCCA
Reut_A0823 fadD2 -73 5.4 TAGAACGATCGTTCGG
Reut_A1419 RSc1772 12 5.2 TCGAACGACCGTTCAC
Reut_A1405 fadB -203 5.5 TTGAACGACCGTGCTA
Reut_A1097 acsA -49 5.4 TAGAACGACCGTTCGC
Reut_A0268 nppD -58 5.2 TCGAACGACCGTTCAT
Reut_A0133 liuR -32 4.9 ACGAACGACCGTTCAC
Reut_A0190 Rmet_0145 -10 5.6 TCGAACGACCGTGCTA
Reut_A1010 paaH1 -43 4.9 ACGTACGATCGTGCTA
Reut_A2994 fadD1 -34 4.7 TCGAACGACCATTCAG
Reut_A0977 RSc2046 -64 5.2 TAGCACGACCGTTCAC
Reut_A1353 bktB -71 5.1 AAGTACGATCGTTCGA
Reut_A1398 alkK -54 4.7 TAGAACGGTTGTTCGT
Ralstonia eutropha H16
H16_A0459 fadP -143 4.9 CTGAACGACCGTTCTT
H16_A0814 etfB -98 5.5 TAGTACGATCGTTCGA
H16_A1324 etfD -248 5.1 AAGAACGACCGTTCCA
H16_A2794 fadD2 -74 5.4 TAGAACGATCGTTCGG
H16_A1554 RSc1772 -97 5.3 TCGAACGATCGTTCAC
H16_A1526 fadB -214 5.5 TTGAACGACCGTGCTA
H16_A1197 acsA -91 5.5 TAGAACGATCGTTCGC
H16_A0293 nppD -59 5.2 TCGAACGACCGTTCAT
H16_A0165 liuR -32 4.9 ACGAACGACCGTTCAC
H16_A0217 Rmet_0145 -46 5.6 TCGAACGATCGTGCTA
H16_A1102 paaH1 -43 4.9 ACGTACGATCGTGCTA
H16_A3288 fadD1 -34 4.7 TCGAACGACCATTCAG
H16_A1066 RSc2046 -87 5.3 CCGAACGGTCGTTCTA
H16_A1066 RSc2046 -64 5.2 TAGCACGACCGTTCAC
H16_A1445 bktB -73 4.5 AAGTACGCTCGTTCGA
H16_A1519 alkK -55 4.4 TAGTACGGTTGTTCGT
Cupriavidus taiwanensis
RALTA_A0402 fadP -141 4.9 CTGAACGACCGTTCTT
RALTA_A0795 etfB -98 5.5 TAGTACGATCGTTCGA
RALTA_A1245 etfD -288 5.1 AAGAACGACCGTTCCA
RALTA_A2284 fadD2 -73 5.4 TAGAACGATCGTTCGG
RALTA_A1480 RSc1772 -97 5.3 TCGAACGATCGTTCAC
RALTA_A1467 fadB -218 5.5 TTGAACGACCGTGCTA
RALTA_A1174 acsA -95 5.5 TAGAACGATCGTTCGC
RALTA_A0233 nppD -58 5.2 TCGAACGACCGTTCAC
RALTA_A0108 liuR -32 4.9 ACGAACGACCGTTCAC
RALTA_A0160 Rmet_0145 -43 5.5 GCGAACGATCGTTCTA
RALTA_A1087 paaH1 -31 4.9 ACGTACGATCGTGCTA
RALTA_A2744 fadD1 -35 4.7 TCGAACGACCATTCAG
RALTA_A1050 RSc2046 -87 5.4 ACGAACGGTCGTTCTA
RALTA_A1050 RSc2046 -64 5.2 TAGCACGACCGTTCAC
RALTA_A1359 bktB -72 4.6 AAGTACGACCGTTCAC
RALTA_A1460 alkK -73 4.6 GCGAACGACCGTCCAA
RALTA_A1460 alkK -54 4.4 TAGTACGGTTGTTCGT
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Regulatory Sites [ FASTA format ] DOWNLOAD