Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Profile of regulator LiuR in Ralstonia

Properties
Regulator family: MerR
Regulation mode:
Biological process: Branched-chain amino acid degradation
Effector:
Regulog: LiuR - Ralstonia
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Ralstonia solanacearum GMI1000
RS05766 paaH -53 5.2 TATGACGTTGACGTAAAC
RS05766 paaH -47 5.7 GTTGACGTAAACGTCAAT
RS00697 serA -34 6 CTTGACGTATACGTCAAC
RS00669 mcm -113 6.6 GTTGACGTTTACGTAAAC
RS03248 RSc0281 -77 6.3 ATTGACGTTTACGTTAGC
RS03248 RSc0281 -71 4.9 GTTTACGTTAGCGTCAAA
RS03247 liuR -101 4.8 GCTAACGTAAACGTCAAT
RS03247 liuR -107 6.1 TTTGACGCTAACGTAAAC
RS03246 liuA -131 5.3 GTTTACGTAAACGTCAAT
RS03246 liuA -137 6.6 GTTGACGTTTACGTAAAC
Ralstonia pickettii 12J
Rpic_0131 null -85 5.1 GTTTACGTTAGCGTCAAT
Rpic_0131 null -91 6.3 ATTGACGTTTACGTTAGC
Rpic_0129 liuA -144 5.3 GTTTACGTAAACGTCAAT
Rpic_2811 paaH -50 4 GCGAACGTAAACGTCAAG
Rpic_2811 paaH -56 5.9 CTTGACGCGAACGTAAAC
Rpic_0115 serA -41 5.7 CTTGACGTATACGTCAAT
Rpic_0089 mcm -118 4.8 GTTGACGAGTGCGTCAAC
Rpic_0129 liuA -150 6.6 ATTGACGTTTACGTAAAC
Rpic_0130 liuR -111 4.8 GCTAACGTAAACGTCAAT
Rpic_0130 liuR -117 6.4 ATTGACGCTAACGTAAAC
Ralstonia metallidurans CH34
Rmet_0210 mcm -98 4.5 GTTAACGTAAACGTCATA
Rmet_0210 mcm -104 5.7 CCTTACGTTAACGTAAAC
Rmet_0531 paaH -44 6.6 ATTGACGTTAACGTAAAC
Rmet_0101 null -50 4.8 GTTAACGTTAGCGTCAAG
Rmet_0101 null -56 6.2 ATTGACGTTAACGTTAGC
Rmet_0103 liuA -81 5.3 GTTTACGTAAACGTCAAT
Rmet_0103 liuA -87 6.6 ATTGACGTTTACGTAAAC
Rmet_0102 liuR -100 6.2 CTTGACGCTAACGTTAAC
Rmet_0102 liuR -94 5.1 GCTAACGTTAACGTCAAT
Ralstonia eutropha JMP134
Reut_A0589 paaH -56 6.6 GTTGACGTTTACGTAAAC
Reut_A0589 paaH -50 4.5 GTTTACGTAAACGGCAGT
Reut_A0132 null -149 5.5 GTTTACGTTAGCGTCAAC
Reut_A0132 null -155 6.2 GTTGACGTTTACGTTAGC
Reut_A0133 liuR -99 6.4 GTTGACGCTAACGTAAAC
Reut_A0133 liuR -93 5.1 GCTAACGTAAACGTCAAC
Reut_A0134 paaI -52 5.3 GTTTACGTAAACGTCAAT
Reut_A0134 paaI -58 6.6 ATTGACGTTTACGTAAAC
Ralstonia eutropha H16
H16_A0602 paaH -47 5.1 GTTTACGTAAACGGCAAC
H16_A0602 paaH -53 6.6 ATTGACGTTTACGTAAAC
H16_A0280 mcm -133 4.2 GTTAACGTCAACGTCATA
H16_A0280 mcm -139 6 CTTTACGTTAACGTCAAC
H16_A0166 paaI -87 5.3 GTTTACGTAAACGTCAAT
H16_A0166 paaI -93 6.6 ATTGACGTTTACGTAAAC
H16_A0164 h16_A0164 -130 6.3 ATTGACGTTTACGTTAGC
H16_A0164 h16_A0164 -124 5.5 GTTTACGTTAGCGTCAAC
H16_A0165 liuR -93 4.8 GCTAACGTAAACGTCAAT
H16_A0165 liuR -99 6.4 GTTGACGCTAACGTAAAC
Cupriavidus taiwanensis
RALTA_A0218 mcm -136 6.1 ATTTACGTTAACGTCAAC
RALTA_A0558 paaH -44 6.1 CTTAACGTTTACGTAAAC
RALTA_A0558 paaH -38 5.3 GTTTACGTAAACGGAAAC
RALTA_A0109 paaI -84 5.5 GTTTACGTAAACGTAAAT
RALTA_A0109 paaI -90 6.6 ATTGACGTTTACGTAAAC
RALTA_A0218 mcm -130 4.2 GTTAACGTCAACGTCATA
RALTA_A0107 null -132 6.2 GTTGACGTTTACGTTAGC
RALTA_A0107 null -126 5.5 GTTTACGTTAGCGTCAAC
RALTA_A0108 liuR -92 5.1 GCTAACGTAAACGTCAAC
RALTA_A0108 liuR -98 6.4 GTTGACGCTAACGTAAAC
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Regulatory Sites [ FASTA format ] DOWNLOAD