Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of Fur in Ralstonia pickettii 12J

Properties
Regulator type: Transcription factor
TF locus tag: Rpic_3944, Rpic_28986
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Regulog: Fur - Ralstonia
Statistics of regulated genes:
- Genes 18
- Operons 10
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 94 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -55
Score: 4.8
Sequence: AATTACAATCATTCTCATT
Locus tag: Rpic_1641
Name: null
Funciton: iron permease FTR1
iron permease FTR1

Position: -55
Score: 4.8
Sequence: AATTACAATCATTCTCATT
Locus tag: Rpic_1817
Name: null
Funciton: iron permease FTR1
iron permease FTR1

Position: -75
Score: 4.7
Sequence: AACGAGAATCATTCTCATC
Locus tag: Rpic_3345
Name: null
Funciton: Uncharacterized iron-regulated membrane protein, DUF337 family
Uncharacterized iron-regulated membrane protein, DUF337 family

Position: -70
Score: 5.6
Sequence: AATGATAACTATTCTCATT
Locus tag: Rpic_2119
Name: null
Funciton: putative hemin uptake protein
putative hemin uptake protein

Position: -65
Score: 5.1
Sequence: AACGATAACAATTCTCATT
Locus tag: Rpic_0101
Name: null
Funciton: TonB-dependent siderophore transporter
Locus tag: Rpic_0100
Name: null
Funciton: Sel1 domain protein repeat-containing protein
Locus tag: Rpic_0099
Name: null
Funciton: 2OG-Fe(II) oxygenase
TonB-dependent siderophore transporter
Sel1 domain protein repeat-containing protein
2OG-Fe(II) oxygenase

Position: -136
Score: 4.8
Sequence: ATTGAGAATCGTTGTCATT
Locus tag: Rpic_3802
Name: null
Funciton: putative TonB-dependent siderophore transporter
Locus tag: Rpic_3803
Name: null
Funciton: 2OG-Fe(II) oxygenase
putative TonB-dependent siderophore transporter
2OG-Fe(II) oxygenase

Position: -75
Score: 5
Sequence: AACAAGAATTGTTCTCATT
Locus tag: Rpic_0205
Name: null
Funciton: Bacterioferritin-associated ferredoxin
Locus tag: Rpic_0206
Name: null
Funciton: Bacterioferritin
Bacterioferritin-associated ferredoxin
Bacterioferritin

Position: -100
Score: 5.1
Sequence: AATAGGAATTGTTCTCATT
Locus tag: Rpic_4266
Name: null
Funciton: putative iron-regulated TonB-dependent transporter
putative iron-regulated TonB-dependent transporter

Position: -289
Score: 4.9
Sequence: AATAGGAATCATTATCGTT
Locus tag: Rpic_2116
Name: null
Funciton: Component of outer membrane metal uptake system, TonB family
Locus tag: Rpic_2117
Name: null
Funciton: Component of outer membrane metal uptake system, ExbB family
Locus tag: Rpic_2118
Name: null
Funciton: Component of outer membrane metal uptake system, ExbD family
Component of outer membrane metal uptake system, TonB family
Component of outer membrane metal uptake system, ExbB family
Component of outer membrane metal uptake system, ExbD family

Position: -61
Score: 4.9
Sequence: AATGAAAACGATTCGCATT
Locus tag: Rpic_3949
Name: null
Funciton: Ferrous iron transport protein A
Locus tag: Rpic_3948
Name: null
Funciton: Ferrous iron transport protein B
Locus tag: Rpic_3947
Name: null
Funciton: putative transmembrane protein involved in ferrous iron transport
Ferrous iron transport protein A
Ferrous iron transport protein B
putative transmembrane protein involved in ferrous iron transport
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