Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of Fur in Ralstonia metallidurans CH34

Properties
Regulator type: Transcription factor
TF locus tag: Rmet_5746, Rmet_2976
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Regulog: Fur - Ralstonia
Statistics of regulated genes:
- Genes 37
- Operons 18
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 94 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -317
Score: 4.7
Sequence: TATGATAATGGTTTGCATT
Position: -99
Score: 4.8
Sequence: AATACTAATCATTTGCATT
Locus tag: Rmet_1104
Name: null
Funciton: TonB-dependent siderophore transporter
TonB-dependent siderophore transporter

Position: -56
Score: 4.4
Sequence: AATTACAATCATTCGCATT
Locus tag: pMOL30_093
Name: pbrT
Funciton: iron permease FTR1
pbrT
iron permease FTR1

Position: -66
Score: 5.1
Sequence: AATACGAATCGTTATCATT
Locus tag: Rmet_5373
Name: null
Funciton: TonB-dependent outer-membrane hemin transporter
Locus tag: Rmet_5374
Name: null
Funciton: hypothetical protein
Locus tag: Rmet_5375
Name: hmuS
Funciton: hemin transport protein HmuS; putative Hemin-degrading
Locus tag: Rmet_5376
Name: hmuT
Funciton: hemin-binding periplasmic protein HmuT
Locus tag: Rmet_5377
Name: hmuU
Funciton: hemin ABC-transport system permease
Locus tag: Rmet_5378
Name: hmuV
Funciton: hemin importer ATP-binding subunit
TonB-dependent outer-membrane hemin transporter
hypothetical protein
hmuS
hemin transport protein HmuS; putative Hemin-degrading
hmuT
hemin-binding periplasmic protein HmuT
hmuU
hemin ABC-transport system permease
hmuV
hemin importer ATP-binding subunit

Position: -54
Score: 4.6
Sequence: AATACGAATTGTTCGTATT
Locus tag: Rmet_1819
Name: null
Funciton: Putative TonB-dependent siderophore transporter
Putative TonB-dependent siderophore transporter

Position: -167
Score: 4.8
Sequence: AATGCAAATGATTAGTATT
Locus tag: Rmet_1105
Name: null
Funciton: putative component of iron permease
Locus tag: Rmet_1106
Name: null
Funciton: Uncharacterized iron-regulated membrane protein, DUF337 family
Locus tag: Rmet_1107
Name: null
Funciton: putative iron uptake protein
Locus tag: Rmet_1108
Name: null
Funciton: putative TonB-dependent siderophore transporter
putative component of iron permease
Uncharacterized iron-regulated membrane protein, DUF337 family
putative iron uptake protein
putative TonB-dependent siderophore transporter

Position: -78
Score: 5.3
Sequence: AATACGAATCATTATTATT
Locus tag: Rmet_1367
Name: null
Funciton: putative transmembrane lipoprotein
putative transmembrane lipoprotein

Position: -62
Score: 4.2
Sequence: AAATAGAATTACAATCATT
Position: -56
Score: 4.4
Sequence: AATTACAATCATTCGCATT
Locus tag: Rmet_5945
Name: pbrT
Funciton: iron permease FTR1
pbrT
iron permease FTR1

Position: -66
Score: 4.7
Sequence: AATGCGAACCATTCGCATT
Locus tag: Rmet_5806
Name: fecA1
Funciton: TonB-dependent outer membrane transporter for Fe(III)-dicitrate
fecA1
TonB-dependent outer membrane transporter for Fe(III)-dicitrate

Position: -107
Score: 4.6
Sequence: ATTGCAAATCATTCCTATT
Locus tag: Rmet_5807
Name: fecA2
Funciton: TonB-dependent outer membrane transporter for Fe(III)-dicitrate
fecA2
TonB-dependent outer membrane transporter for Fe(III)-dicitrate

Position: -302
Score: 4.7
Sequence: AATGCGAATAATTTACATT
Locus tag: Rmet_0837
Name: null
Funciton: TonB-dependent siderophore receptor
Locus tag: Rmet_0838
Name: null
Funciton: 2OG-Fe(II) oxygenase
Locus tag: Rmet_0839
Name: null
Funciton: FMN-dependent alpha-hydroxy acid dehydrogenase
TonB-dependent siderophore receptor
2OG-Fe(II) oxygenase
FMN-dependent alpha-hydroxy acid dehydrogenase

Position: -42
Score: 4.2
Sequence: AACGCGAATCGTTCGCATT
Locus tag: Rmet_3077
Name: null
Funciton: putative TonB-dependent siderophore transporter
Locus tag: Rmet_3078
Name: null
Funciton: 2OG-Fe(II) oxygenase
putative TonB-dependent siderophore transporter
2OG-Fe(II) oxygenase

Position: -91
Score: 5.2
Sequence: AATGGGAATTGTTATCATT
Locus tag: Rmet_0247
Name: null
Funciton: Bacterioferritin-associated ferredoxin
Locus tag: Rmet_0248
Name: null
Funciton: Bacterioferritin
Bacterioferritin-associated ferredoxin
Bacterioferritin

Position: -56
Score: 4.6
Sequence: AATGATAATAGGTCGCATT
Locus tag: Rmet_1120
Name: null
Funciton: Probable RNA polymerase sigma factor FecI
Locus tag: Rmet_1119
Name: null
Funciton: putative regulator of siderophore uptake FecR
Locus tag: Rmet_1118
Name: null
Funciton: putative iron-regulated TonB-dependent siderophore transporter
Probable RNA polymerase sigma factor FecI
putative regulator of siderophore uptake FecR
putative iron-regulated TonB-dependent siderophore transporter

Position: -347
Score: 5.3
Sequence: AATACGAATCATTATTATT
Locus tag: Rmet_1366
Name: null
Funciton: putative transmembrane lipoprotein
Locus tag: Rmet_1365
Name: null
Funciton: Uncharacterized iron-regulated membrane protein, DUF337 family
putative transmembrane lipoprotein
Uncharacterized iron-regulated membrane protein, DUF337 family

Position: -73
Score: 5.6
Sequence: AATGATAACAATTCTCATT
Locus tag: Rmet_2280
Name: null
Funciton: hemin uptake protein
hemin uptake protein

Position: -120
Score: 5
Sequence: ATTGATACTCATTATCATT
Locus tag: Rmet_0720
Name: null
Funciton: putative exported protein
putative exported protein

Position: -208
Score: 5.3
Sequence: AATAAGAATCATTATCGTT
Locus tag: Rmet_2277
Name: null
Funciton: Component of outer membrane metal uptake system, TonB family
Locus tag: Rmet_2278
Name: null
Funciton: Component of outer membrane metal uptake system, ExbB family
Locus tag: Rmet_2279
Name: null
Funciton: Component of outer membrane metal uptake system, ExbD family
Component of outer membrane metal uptake system, TonB family
Component of outer membrane metal uptake system, ExbB family
Component of outer membrane metal uptake system, ExbD family

Position: -82
Score: 4.2
Sequence: ATCGAGAACGATTTCTATT
Locus tag: Rmet_5891
Name: feoA
Funciton: Ferrous iron transport protein A
Locus tag: Rmet_5890
Name: feoB
Funciton: Ferrous iron transport protein B
Locus tag: Rmet_5889
Name: null
Funciton: putative transmembrane protein involved in ferrous iron transport
feoA
Ferrous iron transport protein A
feoB
Ferrous iron transport protein B
putative transmembrane protein involved in ferrous iron transport
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