Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of Dnr in Ralstonia metallidurans CH34

Properties
Regulator type: Transcription factor
TF locus tag: Rmet_4521
Regulator family: CRP
Regulation mode: activator
Biological process: Denitrification
Effector: Nitric oxide
Regulog: Dnr - Ralstonia
Statistics of regulated genes:
- Genes 11
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 9 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -118
Score: 5.6
Sequence: CGTTGACTCGTGTCAATC
Locus tag: Rmet_3172
Name: null
Funciton: Nitrite reductase NirS (Cytochrome cd1)
Locus tag: Rmet_3171
Name: null
Funciton: cytochrome c, class I
Locus tag: Rmet_3170
Name: null
Funciton: heme d1 biosynthesis protein (NirJ)
Locus tag: Rmet_3169
Name: null
Funciton: C-type cytochrome (NirN)
Locus tag: Rmet_3168
Name: null
Funciton: Uroporphyrin-III C-methyltransferase
Nitrite reductase NirS (Cytochrome cd1)
cytochrome c, class I
heme d1 biosynthesis protein (NirJ)
C-type cytochrome (NirN)
Uroporphyrin-III C-methyltransferase

Position: -165
Score: 5.1
Sequence: ACATGACTTATGTCAAGC
Locus tag: Rmet_4917
Name: nosZ
Funciton: nitrous oxide reductase
Locus tag: Rmet_4916
Name: nosR
Funciton: putative transmembrane regulatory protein nosR
Locus tag: Rmet_4915
Name: nosD
Funciton: putative copper binding periplasmic protein
Locus tag: Rmet_4914
Name: nosF
Funciton: putative copper ATP-binding ABC transporter
Locus tag: Rmet_4913
Name: nosY
Funciton: putative NosY transmembrane protein
Locus tag: Rmet_4912
Name: nosL
Funciton: NosL family protein
nosZ
nitrous oxide reductase
nosR
putative transmembrane regulatory protein nosR
nosD
putative copper binding periplasmic protein
nosF
putative copper ATP-binding ABC transporter
nosY
putative NosY transmembrane protein
nosL
NosL family protein
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