Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of BioQ in Rhodococcus opacus B4

Properties
Regulator type: Transcription factor
TF locus tag: ROP_07710
Regulator family: TetR
Regulation mode: repressor
Biological process: Biotin biosynthesis
Effector: Biotin
Regulog: BioQ - Actinomycetales
Statistics of regulated genes:
- Genes 14
- Operons 6
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 86 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -38
Score: 5.4
Sequence: CTTGAACGTCGTTCAAG
Locus tag: ROP_52960
Name: bioY
Funciton: Substrate-specific component BioY of biotin ECF transporter
Locus tag: ROP_52970
Name: null
Funciton: hypothetical protein
Locus tag: ROP_52980
Name: null
Funciton: probable beta-ketoadipyl-CoA thiolase
bioY
Substrate-specific component BioY of biotin ECF transporter
hypothetical protein
probable beta-ketoadipyl-CoA thiolase

Position: -38
Score: 5.4
Sequence: CTTGAACGTCGTTCAAG
Locus tag: ROP_53000
Name: bioY
Funciton: Substrate-specific component BioY of biotin ECF transporter
Locus tag: ROP_53010
Name: null
Funciton: hypothetical protein
Locus tag: ROP_53020
Name: null
Funciton: acetyl-CoA acetyltransferase
Locus tag: ROP_53030
Name: bioM
Funciton: ATPase component BioM of energizing module of biotin ECF transporter
Locus tag: ROP_53040
Name: bioN
Funciton: Transmembrane component BioN of energizing module of biotin ECF transporter
Locus tag: ROP_53050
Name: null
Funciton: putative acid--CoA ligase
bioY
Substrate-specific component BioY of biotin ECF transporter
hypothetical protein
acetyl-CoA acetyltransferase
bioM
ATPase component BioM of energizing module of biotin ECF transporter
bioN
Transmembrane component BioN of energizing module of biotin ECF transporter
putative acid--CoA ligase

Position: -24
Score: 5.7
Sequence: GTTGAACACCGTTCAAG
Locus tag: ROP_07820
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase
Locus tag: ROP_07810
Name: bioD
Funciton: dethiobiotin synthetase
bioF
8-amino-7-oxononanoate synthase
bioD
dethiobiotin synthetase

Position: -41
Score: 5.7
Sequence: CTTGAACGGTGTTCAAC
Locus tag: ROP_07830
Name: bioA
Funciton: adenosylmethionine-8-amino-7-oxononanoate aminotransferase
bioA
adenosylmethionine-8-amino-7-oxononanoate aminotransferase

Position: -99
Score: 5.4
Sequence: ATTGAACACCGTACAAG
Position: -83
Score: 5.3
Sequence: GTTGAACGGTGTTCACG
Locus tag: ROP_07710
Name: bioQ
Funciton: biotin repressor, TetR family
bioQ
biotin repressor, TetR family

Position: -88
Score: 5.3
Sequence: CGTGAACACCGTTCAAC
Position: -72
Score: 5.4
Sequence: CTTGTACGGTGTTCAAT
Locus tag: ROP_07700
Name: bioB
Funciton: biotin synthase
bioB
biotin synthase
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