Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of FliA in Desulfovibrio magneticus RS-1

Properties
Regulator type: Transcription factor
TF locus tag: DMR_23910
Regulator family: Sigma70
Regulation mode:
Biological process: Motility
Effector:
Regulog: FliA - Desulfovibrionales
Statistics of regulated genes:
- Genes 16
- Operons 9
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 64 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -35
Score: 7.2
Sequence: TAAAGACG-(12)-ACCGATAG
Locus tag: DMR_45550
Name: flaG
Funciton: flagellin FlaG, putative
flaG
flagellin FlaG, putative

Position: -127
Score: 7
Sequence: TAAAGAAC-(12)-GTCGATAT
Locus tag: DMR_03990
Name: hag
Funciton: flagellin domain protein
Locus tag: DMR_03980
Name: fliD
Funciton: Flagellar hook-associated protein FliD
Locus tag: DMR_03970
Name: fliS
Funciton: Flagellar biosynthesis protein FliS
Locus tag: DMR_03960
Name: null
Funciton: hypothetical protein
Locus tag: DMR_03950
Name: null
Funciton: MJ0042 family finger-like protein
Locus tag: DMR_03940
Name: null
Funciton: conserved hypothetical protein
Locus tag: DMR_03930
Name: null
Funciton: lipoprotein, putative
hag
flagellin domain protein
fliD
Flagellar hook-associated protein FliD
fliS
Flagellar biosynthesis protein FliS
hypothetical protein
MJ0042 family finger-like protein
conserved hypothetical protein
lipoprotein, putative

Position: -223
Score: 7.3
Sequence: TAAAGGGT-(11)-GCCGATAG
Locus tag: DMR_12500
Name: fliC
Funciton: flagellin
fliC
flagellin

Position: -90
Score: 8.1
Sequence: TAAAGACT-(12)-GCCGATAA
Locus tag: DMR_33980
Name: null
Funciton: Anti-sigma-28 factor FlgM family protein
Anti-sigma-28 factor FlgM family protein

Position: -61
Score: 7
Sequence: TAATCATC-(12)-GCCGATAA
Locus tag: DMR_31460
Name: flgM
Funciton: negative regulator of flagellin synthesis FlgM
flgM
negative regulator of flagellin synthesis FlgM

Position: -52
Score: 7.8
Sequence: TAAAGGTT-(11)-TCCGATAA
Locus tag: DMR_31450
Name: null
Funciton: hypothetical protein
hypothetical protein

Position: -60
Score: 8.1
Sequence: TAAAGCCT-(11)-GCCGATAA
Locus tag: DMR_35470
Name: null
Funciton: hypothetical protein
hypothetical protein

Position: -63
Score: 7.9
Sequence: TAAAGATT-(11)-GCCGATGG
Locus tag: DMR_17600
Name: null
Funciton: hypothetical protein
Locus tag: DMR_17590
Name: null
Funciton: Peptidoglycan-binding domain 1 protein
hypothetical protein
Peptidoglycan-binding domain 1 protein

Position: -63
Score: 8.2
Sequence: TAAAGTTC-(12)-GCCGATGA
Locus tag: DMR_31110
Name: null
Funciton: flagellin N-terminal domain-containing protein
flagellin N-terminal domain-containing protein
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD