Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of FliA in Desulfovibrio desulfuricans G20

Properties
Regulator type: Transcription factor
TF locus tag: Dde_0383
Regulator family: Sigma70
Regulation mode:
Biological process: Motility
Effector:
Regulog: FliA - Desulfovibrionales
Statistics of regulated genes:
- Genes 12
- Operons 9
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 64 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -85
Score: 6.7
Sequence: TAAAGTGA-(11)-GTCGATAG
Locus tag: Dde_1710
Name: flaG
Funciton: flagellin FlaG, putative
flaG
flagellin FlaG, putative

Position: -169
Score: 8.5
Sequence: TAAAGTTC-(11)-GCCGATAA
Locus tag: Dde_1120
Name: fliD
Funciton: Flagellar hook-associated protein FliD
Locus tag: Dde_1119
Name: fliS
Funciton: Flagellar biosynthesis protein FliS
fliD
Flagellar hook-associated protein FliD
fliS
Flagellar biosynthesis protein FliS

Position: -118
Score: 7.2
Sequence: TAATGTTT-(11)-GCCGTTAA
Position: -49
Score: 8
Sequence: TAAAGTTC-(11)-ACCGATAA
Locus tag: Dde_0639
Name: null
Funciton: hypothetical protein
Locus tag: Dde_0638
Name: flgM
Funciton: negative regulator of flagellin synthesis FlgM
hypothetical protein
flgM
negative regulator of flagellin synthesis FlgM

Position: -135
Score: 7.8
Sequence: TAAAGTAA-(11)-GCCGATAG
Locus tag: Dde_1570
Name: flaD
Funciton: flagellin, putative
flaD
flagellin, putative

Position: -89
Score: 7.2
Sequence: TAAAGTAA-(12)-GCCGAAAC
Locus tag: Dde_2399
Name: null
Funciton: hypothetical protein
Locus tag: Dde_2398
Name: null
Funciton: conserved domain protein
hypothetical protein
conserved domain protein

Position: -90
Score: 7.5
Sequence: TAAAGCCG-(11)-GCCGATAT
Locus tag: Dde_2384
Name: null
Funciton: response regulator receiver protein
response regulator receiver protein

Position: -188
Score: 7.5
Sequence: TAAAGACA-(11)-GCCGATAT
Locus tag: Dde_3018
Name: null
Funciton: flagellin N-terminal domain-containing protein
flagellin N-terminal domain-containing protein

Position: -84
Score: 7
Sequence: TAAAGAAA-(11)-GCCGATTG
Locus tag: Dde_2382
Name: null
Funciton: conserved hypothetical protein
conserved hypothetical protein

Position: -105
Score: 7.6
Sequence: TAAAGCTT-(12)-GCCGATCA
Locus tag: Dde_1577
Name: cheA-2
Funciton: chemotaxis protein CheA
cheA-2
chemotaxis protein CheA
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD