Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of FliA in Desulfovibrio vulgaris Hildenborough

Properties
Regulator type: Transcription factor
TF locus tag: DVU3229
Regulator family: Sigma70
Regulation mode:
Biological process: Motility
Effector:
Regulog: FliA - Desulfovibrionales
Statistics of regulated genes:
- Genes 16
- Operons 10
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 64 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -255
Score: 6.4
Sequence: TCATGCTC-(11)-GCCGATGC
Locus tag: DVU2606
Name: null
Funciton: hypothetical protein
Locus tag: DVU2607
Name: null
Funciton: hypothetical protein
Locus tag: DVU2608
Name: motA-3
Funciton: flagellar motor protein MotA
Locus tag: DVU2609
Name: motB
Funciton: Flagellar motor rotation protein MotB
hypothetical protein
hypothetical protein
motA-3
flagellar motor protein MotA
motB
Flagellar motor rotation protein MotB

Position: -127
Score: 8.2
Sequence: TAAAGCTC-(12)-GCCGATAA
Locus tag: DVU0863
Name: fliD
Funciton: Flagellar hook-associated protein FliD
Locus tag: DVU0862
Name: fliS
Funciton: Flagellar biosynthesis protein FliS
Locus tag: DVU0861
Name: null
Funciton: glycosyl transferase, group 1 family protein
fliD
Flagellar hook-associated protein FliD
fliS
Flagellar biosynthesis protein FliS
glycosyl transferase, group 1 family protein

Position: -138
Score: 7.5
Sequence: TAAAGAAG-(11)-GCCGATGA
Position: -48
Score: 8.1
Sequence: TAAAGTTC-(11)-TCCGATAA
Locus tag: DVU0524
Name: null
Funciton: hypothetical protein
Locus tag: DVU0523
Name: flgM
Funciton: negative regulator of flagellin synthesis FlgM
hypothetical protein
flgM
negative regulator of flagellin synthesis FlgM

Position: -131
Score: 8
Sequence: TAAAGTCC-(11)-GCCGATAC
Locus tag: DVU2082
Name: flaD
Funciton: flagellin, putative
flaD
flagellin, putative

Position: -63
Score: 7.9
Sequence: TAAAGTTC-(11)-TCCGATAC
Locus tag: DVU2948
Name: null
Funciton: flagellin domain protein
flagellin domain protein

Position: -145
Score: 7.8
Sequence: TAAAGCAC-(11)-GCCGATAC
Locus tag: DVU1857
Name: null
Funciton: methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein

Position: -77
Score: 8.1
Sequence: TAAAGTAT-(11)-GCCGATAC
Locus tag: DVU1073
Name: null
Funciton: conserved domain protein
conserved domain protein

Position: -67
Score: 7.2
Sequence: TCAAGCAT-(11)-GCCGATAG
Locus tag: DVU1339
Name: null
Funciton: lipoprotein, putative
lipoprotein, putative

Position: -62
Score: 7.1
Sequence: TCAAGTCG-(11)-GCCGATAT
Locus tag: DVU0976
Name: null
Funciton: response regulator receiver protein
response regulator receiver protein

Position: -115
Score: 8.1
Sequence: TAAAGATG-(11)-GCCGATAA
Locus tag: DVU2072
Name: cheA-3
Funciton: chemotaxis protein CheA
cheA-3
chemotaxis protein CheA
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD