Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of LexA in Bacillus halodurans C-125

Properties
Regulator type: Transcription factor
TF locus tag: BH2356
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Bacillales
Statistics of regulated genes:
- Genes 16
- Operons 10
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 206 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -57
Score: 4
Sequence: ACGAACAAATATTCAC
Position: -30
Score: 5
Sequence: CAGAACAAATGTTCTT
Locus tag: BH2741
Name: yqjW
Funciton: DNA polymerase IV (EC 2.7.7.7)
yqjW
DNA polymerase IV (EC 2.7.7.7)

Position: -317
Score: 4.6
Sequence: GCAAACATAAGTTCTA
Position: -288
Score: 4.8
Sequence: ACAAACAAGTGTTCTT
Locus tag: BH2354
Name: yneB
Funciton: Site-specific recombinase, DNA invertase
Locus tag: BH2353
Name: ynzC
Funciton: Hypothetical protein
Locus tag: BH2352
Name: tkt
Funciton: Transketolase (EC 2.2.1.1)
yneB
Site-specific recombinase, DNA invertase
ynzC
Hypothetical protein
tkt
Transketolase (EC 2.2.1.1)

Position: -40
Score: 4.5
Sequence: ACGAACACATGTTCCT
Locus tag: BH2963
Name: yhjD
Funciton: Hypothetical protein
yhjD
Hypothetical protein

Position: -91
Score: 4.9
Sequence: CAAAACAAACGTTCGT
Locus tag: BH3595
Name: uvrB
Funciton: Excinuclease ABC subunit B
Locus tag: BH3594
Name: uvrA
Funciton: Excinuclease ABC subunit A
uvrB
Excinuclease ABC subunit B
uvrA
Excinuclease ABC subunit A

Position: -343
Score: 4
Sequence: AAAAATTCACGTTTGT
Position: -121
Score: 4.9
Sequence: GCGAATAAATGTTCGT
Locus tag: BH2383
Name: recA
Funciton: Recombination protein A
recA
Recombination protein A

Position: -72
Score: 4.9
Sequence: CCGAACATGCGTTTGT
Locus tag: BH2140
Name: parE
Funciton: Topoisomerase IV subunit B (EC 5.99.1.-)
Locus tag: BH2139
Name: parC
Funciton: Topoisomerase IV subunit A (EC 5.99.1.-)
parE
Topoisomerase IV subunit B (EC 5.99.1.-)
parC
Topoisomerase IV subunit A (EC 5.99.1.-)

Position: -107
Score: 4.7
Sequence: AAGAACACTTGTTTGT
Position: -78
Score: 4.9
Sequence: TAGAACTTATGTTTGC
Locus tag: BH2356
Name: lexA
Funciton: SOS-response transcriptional repressor
lexA
SOS-response transcriptional repressor

Position: -71
Score: 4.8
Sequence: ACGAACGTACGTTCTT
Position: -51
Score: 4.8
Sequence: TCGAATGTACGTTCGT
Locus tag: BH1502
Name: BH1502
Funciton: Hypothetical protein
BH1502
Hypothetical protein

Position: -8
Score: 4.6
Sequence: AAGAACAAGTGTTTGG
Locus tag: BH0648
Name: pcrA
Funciton: ATP-dependent DNA helicase
Locus tag: BH0649
Name: ligA
Funciton: NAD-dependent DNA ligase
Locus tag: BH0650
Name: yerH
Funciton: Putative lipoprotein
pcrA
ATP-dependent DNA helicase
ligA
NAD-dependent DNA ligase
yerH
Putative lipoprotein

Position: 17
Score: 4.3
Sequence: TCGAACTTTTGTTAGC
Locus tag: BH0831
Name: vpr
Funciton: Minor extracellular protease vpr precursor (EC 3.4.21.-)
vpr
Minor extracellular protease vpr precursor (EC 3.4.21.-)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD