Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of LexA in Bacillus licheniformis DSM 13

Properties
Regulator type: Transcription factor
TF locus tag: BLi02032
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Bacillales
Statistics of regulated genes:
- Genes 31
- Operons 18
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 206 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -177
Score: 4
Sequence: CAGAATGTACATTCGT
Locus tag: BLi02476
Name: ypuD
Funciton: Hypothetical protein
ypuD
Hypothetical protein

Position: -349
Score: 4.8
Sequence: AAAAACATTAGTTTGT
Locus tag: BLi00626
Name: yozL
Funciton: Hypothetical protein
yozL
Hypothetical protein

Position: -425
Score: 5.1
Sequence: ACAAACATAGGTTCGA
Position: -395
Score: 4.9
Sequence: AGAAACATTTGTTCGT
Position: -357
Score: 4
Sequence: CCGAACAAACATTCTG
Locus tag: BLi02034
Name: yneB
Funciton: Site-specific recombinase, DNA invertase
Locus tag: BLi02035
Name: ynzC
Funciton: Hypothetical protein
Locus tag: BLi02036
Name: tkt
Funciton: Transketolase (EC 2.2.1.1)
Locus tag: BLi02037
Name: yneE
Funciton: Hypothetical protein
Locus tag: BLi02038
Name: yneF
Funciton: Hypothetical protein
yneB
Site-specific recombinase, DNA invertase
ynzC
Hypothetical protein
tkt
Transketolase (EC 2.2.1.1)
yneE
Hypothetical protein
yneF
Hypothetical protein

Position: -45
Score: 4.6
Sequence: CAGAACAAATGTTCCT
Locus tag: BLi01120
Name: yhjD
Funciton: Hypothetical protein
yhjD
Hypothetical protein

Position: -30
Score: 4.9
Sequence: CAGAACATTCGTTCGA
Locus tag: BLi01317
Name: xkdA
Funciton: Phage-like element PBSX protein xkdA
xkdA
Phage-like element PBSX protein xkdA

Position: -81
Score: 4.9
Sequence: CCGAACTTTAGTTCGT
Locus tag: BLi03759
Name: uvrB
Funciton: Excinuclease ABC subunit B
Locus tag: BLi03758
Name: uvrA
Funciton: Excinuclease ABC subunit A
uvrB
Excinuclease ABC subunit B
uvrA
Excinuclease ABC subunit A

Position: -145
Score: 4.2
Sequence: CAGAACGATTGTTCTC
Locus tag: BLi02762
Name: sda
Funciton: Sporulation inhibitor sda
sda
Sporulation inhibitor sda

Position: -149
Score: 5.3
Sequence: ACGAACATTTGTTCTT
Locus tag: BLi00181
Name: pbpX
Funciton: penicillin-binding endopeptidase X
pbpX
penicillin-binding endopeptidase X

Position: -259
Score: 4.3
Sequence: TCGAATTTCAGTTCGC
Position: -86
Score: 4.8
Sequence: TCGAATATGCGTTCGC
Locus tag: BLi01918
Name: recA
Funciton: Recombination protein A
recA
Recombination protein A

Position: -346
Score: 4.1
Sequence: ATGAATTTGTGTTTGT
Position: -141
Score: 4.2
Sequence: CAGAATGTTTGTTCGG
Position: -103
Score: 4.6
Sequence: ACGAACAAATGTTTCT
Position: -73
Score: 5.1
Sequence: TCGAACCTATGTTTGT
Locus tag: BLi02032
Name: lexA
Funciton: SOS-response transcriptional repressor
lexA
SOS-response transcriptional repressor

Position: -280
Score: 4.8
Sequence: AGGAATATTTGTTCGT
Locus tag: BLi02414
Name: hupA
Funciton: DNA-binding protein HU 1
hupA
DNA-binding protein HU 1

Position: -74
Score: 4.5
Sequence: AAGAACATTTGTTTCT
Locus tag: BLi03072
Name: dnaE
Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
Locus tag: BLi03071
Name: ytsJ
Funciton: NADP-dependent malic enzyme (EC 1.1.1.40)
dnaE
DNA polymerase III alpha subunit (EC 2.7.7.7)
ytsJ
NADP-dependent malic enzyme (EC 1.1.1.40)

Position: -41
Score: 5.4
Sequence: AAGAACAAATGTTCGT
Locus tag: BLi00182
Name: BH1502
Funciton: Hypothetical protein
BH1502
Hypothetical protein

Position: -81
Score: 4.7
Sequence: AGAAACAAATGTTCTT
Locus tag: BLi03073
Name: ytrH
Funciton: Sporulation membrane protein
Locus tag: BLi03074
Name: ytrI
Funciton: Sporulation membrane protein
ytrH
Sporulation membrane protein
ytrI
Sporulation membrane protein

Position: -33
Score: 5.2
Sequence: TAGAACATATGTTTGA
Locus tag: BLi00715
Name: pcrA
Funciton: ATP-dependent DNA helicase
Locus tag: BLi00716
Name: ligA
Funciton: NAD-dependent DNA ligase
Locus tag: BLi00717
Name: yerH
Funciton: Putative lipoprotein
pcrA
ATP-dependent DNA helicase
ligA
NAD-dependent DNA ligase
yerH
Putative lipoprotein

Position: -51
Score: 3.8
Sequence: TAGAACGTGCATTCGC
Locus tag: BLi01068
Name: yhaO
Funciton: DNA repair exonuclease family protein YhaO
Locus tag: BLi01069
Name: yhaN
Funciton: DNA double-strand break repair rad50 ATPase
Locus tag: BLi01070
Name: yhaM
Funciton: 3'-5' exoribonuclease yhaM (EC 3.1.-.-)
Locus tag: BLi01071
Name: yhaL
Funciton: Conserved hypothetical protein
yhaO
DNA repair exonuclease family protein YhaO
yhaN
DNA double-strand break repair rad50 ATPase
yhaM
3'-5' exoribonuclease yhaM (EC 3.1.-.-)
yhaL
Conserved hypothetical protein

Position: -179
Score: 4.5
Sequence: AGGAACATTTGTTCTG
Locus tag: BLi01121
Name: yhjE
Funciton: Alkaline phosphatase like protein
Locus tag: BLi01122
Name: sipV
Funciton: Signal peptidase I (EC 3.4.21.89)
yhjE
Alkaline phosphatase like protein
sipV
Signal peptidase I (EC 3.4.21.89)

Position: -213
Score: 3.7
Sequence: AAGAACGTATATTCCC
Locus tag: BLi04019
Name: vpr
Funciton: Minor extracellular protease vpr precursor (EC 3.4.21.-)
vpr
Minor extracellular protease vpr precursor (EC 3.4.21.-)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD