Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of LexA in Bacillus subtilis subsp. subtilis str. 168

Properties
Regulator type: Transcription factor
TF locus tag: BSU17850
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Bacillales
Statistics of regulated genes:
- Genes 44
- Operons 28
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 206 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -57
Score: 4.7
Sequence: ACGAACATACTTTCGC
Position: -29
Score: 4.9
Sequence: GCGAACATAAGTTCTT
Locus tag: BSU23710
Name: yqjW
Funciton: DNA polymerase IV (EC 2.7.7.7)
yqjW
DNA polymerase IV (EC 2.7.7.7)

Position: -268
Score: 4.1
Sequence: TCGAGCAAGAGTTCTT
Locus tag: BSU24580
Name: yqhH
Funciton: Uncharacterized ATP-dependent helicase YqhH, SNF2 family
Locus tag: BSU24590
Name: yqhG
Funciton: Hypothetical protein
yqhH
Uncharacterized ATP-dependent helicase YqhH, SNF2 family
yqhG
Hypothetical protein

Position: -171
Score: 4.7
Sequence: CAGAACATAAATTCGT
Locus tag: BSU23300
Name: ypuD
Funciton: Hypothetical protein
ypuD
Hypothetical protein

Position: -113
Score: 4.7
Sequence: TCGAACTTTTGTTCTG
Position: -83
Score: 4.1
Sequence: AGGAACGTTTGTTCTG
Locus tag: BSU18950
Name: yozL
Funciton: Hypothetical protein
yozL
Hypothetical protein

Position: -78
Score: 4.7
Sequence: TCGAACTTTTGTTCTG
Position: -48
Score: 4.4
Sequence: AAGAACGTTTGTTCTG
Locus tag: BSU21510
Name: yozL
Funciton: Hypothetical protein
yozL
Hypothetical protein

Position: -428
Score: 5.1
Sequence: ACAAACATAGGTTCGA
Position: -399
Score: 4.4
Sequence: AGAAACGTTTGTTCGT
Locus tag: BSU17870
Name: yneB
Funciton: Site-specific recombinase, DNA invertase
Locus tag: BSU17880
Name: ynzC
Funciton: Hypothetical protein
Locus tag: BSU17890
Name: tkt
Funciton: Transketolase (EC 2.2.1.1)
Locus tag: BSU17900
Name: yneE
Funciton: Hypothetical protein
Locus tag: BSU17910
Name: yneF
Funciton: Hypothetical protein
yneB
Site-specific recombinase, DNA invertase
ynzC
Hypothetical protein
tkt
Transketolase (EC 2.2.1.1)
yneE
Hypothetical protein
yneF
Hypothetical protein

Position: -125
Score: 5
Sequence: ACGAACGTATGTTTGT
Locus tag: BSU13800
Name: ykvR
Funciton: Hypothetical protein
ykvR
Hypothetical protein

Position: -35
Score: 4.3
Sequence: TAGAACAAACGTTCCC
Locus tag: BSU10470
Name: yhjD
Funciton: Hypothetical protein
yhjD
Hypothetical protein

Position: -140
Score: 4.6
Sequence: CAGAACATTTGTTCCT
Locus tag: BSU01520
Name: ybaK
Funciton: Putative alkylated deoxynucleotide triphosphohydrolase
Locus tag: BSU01530
Name: cwlD
Funciton: Germination-specific N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28), cell wall hydrolase CwlD
ybaK
Putative alkylated deoxynucleotide triphosphohydrolase
cwlD
Germination-specific N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28), cell wall hydrolase CwlD

Position: -59
Score: 5
Sequence: AAAAACAAACGTTCGT
Locus tag: BSU28490
Name: uvrC
Funciton: Excinuclease ABC subunit C
uvrC
Excinuclease ABC subunit C

Position: -93
Score: 4.9
Sequence: CCGAACTTTAGTTCGT
Locus tag: BSU35170
Name: uvrB
Funciton: Excinuclease ABC subunit B
Locus tag: BSU35160
Name: uvrA
Funciton: Excinuclease ABC subunit A
uvrB
Excinuclease ABC subunit B
uvrA
Excinuclease ABC subunit A

Position: -99
Score: 4.8
Sequence: CAGAACAAGTGTTCTT
Position: -69
Score: 4.7
Sequence: CCGAACGTATGTTTGC
Locus tag: BSU35770
Name: tagC
Funciton: Polyglycerol phosphate assembly and export
tagC
Polyglycerol phosphate assembly and export

Position: -127
Score: 4.4
Sequence: CAGAACGATTGTTCTT
Locus tag: BSU25690
Name: sda
Funciton: Sporulation inhibitor sda
sda
Sporulation inhibitor sda

Position: -87
Score: 4.7
Sequence: CCGAATATGCGTTCGC
Locus tag: BSU16940
Name: recA
Funciton: Recombination protein A
Locus tag: BSU16950
Name: pbpX
Funciton: penicillin-binding endopeptidase X
recA
Recombination protein A
pbpX
penicillin-binding endopeptidase X

Position: -220
Score: 4.9
Sequence: ACAAACATACGTTCTC
Locus tag: BSU18090
Name: parE
Funciton: Topoisomerase IV subunit B (EC 5.99.1.-)
Locus tag: BSU18100
Name: parC
Funciton: Topoisomerase IV subunit A (EC 5.99.1.-)
parE
Topoisomerase IV subunit B (EC 5.99.1.-)
parC
Topoisomerase IV subunit A (EC 5.99.1.-)

Position: -139
Score: 4.2
Sequence: AGGAATGTTTGTTCGC
Position: -102
Score: 4.4
Sequence: ACGAACAAACGTTTCT
Position: -73
Score: 5.1
Sequence: TCGAACCTATGTTTGT
Locus tag: BSU17850
Name: lexA
Funciton: SOS-response transcriptional repressor
lexA
SOS-response transcriptional repressor

Position: -281
Score: 4.3
Sequence: AGGAATATTCGTTCGG
Locus tag: BSU22790
Name: hupA
Funciton: DNA-binding protein HU 1
hupA
DNA-binding protein HU 1

Position: -76
Score: 4.5
Sequence: AAGAACATTTGTTTCT
Locus tag: BSU29230
Name: dnaE
Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
Locus tag: BSU29220
Name: ytsJ
Funciton: NADP-dependent malic enzyme (EC 1.1.1.40)
dnaE
DNA polymerase III alpha subunit (EC 2.7.7.7)
ytsJ
NADP-dependent malic enzyme (EC 1.1.1.40)

Position: -56
Score: 4.8
Sequence: AAGAACTCATGTTCGT
Locus tag: BSU05630
Name: dinB
Funciton: Nuclease inhibitor
dinB
Nuclease inhibitor

Position: -180
Score: 5.1
Sequence: ACGAACAAACGTTCTT
Locus tag: BSU17260
Name: aprX
Funciton: Alkaline serine protease
aprX
Alkaline serine protease

Position: -64
Score: 3.7
Sequence: CAGAACGTGCATTCGC
Locus tag: BSU09910
Name: yhaO
Funciton: DNA repair exonuclease family protein YhaO
Locus tag: BSU09920
Name: yhaN
Funciton: DNA double-strand break repair rad50 ATPase
Locus tag: BSU09930
Name: yhaM
Funciton: 3'-5' exoribonuclease yhaM (EC 3.1.-.-)
Locus tag: BSU09940
Name: yhaL
Funciton: Conserved hypothetical protein
yhaO
DNA repair exonuclease family protein YhaO
yhaN
DNA double-strand break repair rad50 ATPase
yhaM
3'-5' exoribonuclease yhaM (EC 3.1.-.-)
yhaL
Conserved hypothetical protein

Position: -36
Score: 4.4
Sequence: TAGAACGTATGTTTTG
Locus tag: BSU06610
Name: pcrA
Funciton: ATP-dependent DNA helicase
Locus tag: BSU06620
Name: ligA
Funciton: NAD-dependent DNA ligase
pcrA
ATP-dependent DNA helicase
ligA
NAD-dependent DNA ligase

Position: -232
Score: 4.4
Sequence: TAAAACAATTGTTCTG
Locus tag: BSU06630
Name: yerH
Funciton: Putative lipoprotein
yerH
Putative lipoprotein

Position: -27
Score: 4.6
Sequence: AAGAACAAAAGTTTGG
Locus tag: BSU24740
Name: yqxL
Funciton: Magnesium and cobalt transport protein
yqxL
Magnesium and cobalt transport protein

Position: -79
Score: 4.7
Sequence: AGAAACAAATGTTCTT
Locus tag: BSU29239
Name: ytrH
Funciton: Sporulation membrane protein
Locus tag: BSU29240
Name: ytrI
Funciton: Sporulation membrane protein
ytrH
Sporulation membrane protein
ytrI
Sporulation membrane protein

Position: -191
Score: 4
Sequence: ACGAACGTATATTCCT
Locus tag: BSU38090
Name: vpr
Funciton: Minor extracellular protease vpr precursor (EC 3.4.21.-)
vpr
Minor extracellular protease vpr precursor (EC 3.4.21.-)

Position: -65
Score: 5
Sequence: AAGAACATTCGTTCTT
Locus tag: BSU06060
Name: ydiO
Funciton: DNA-cytosine methyltransferase (EC 2.1.1.37)
Locus tag: BSU06070
Name: ydiP
Funciton: DNA-cytosine methyltransferase (EC 2.1.1.37)
ydiO
DNA-cytosine methyltransferase (EC 2.1.1.37)
ydiP
DNA-cytosine methyltransferase (EC 2.1.1.37)

Position: -30
Score: 4.9
Sequence: CAGAACAAACGTTCGA
Locus tag: BSU12500
Name: xkdA
Funciton: Phage-like element PBSX protein xkdA
xkdA
Phage-like element PBSX protein xkdA
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