Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of Rex in Staphylococcus carnosus subsp. carnosus TM300

Properties
Regulator type: Transcription factor
TF locus tag: Sca_1553
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Regulog: Rex - Staphylococcaceae
Statistics of regulated genes:
- Genes 14
- Operons 7
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 74 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -93
Score: 5.3
Sequence: AAGTGATTTTTTTCACAA
Locus tag: Sca_2017
Name: pflB
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
Locus tag: Sca_2016
Name: pflA
Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
pflB
Pyruvate formate-lyase (EC 2.3.1.54)
pflA
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)

Position: -64
Score: 5.7
Sequence: TTGTGAATACATTCACAT
Locus tag: Sca_1899
Name: nirR
Funciton: Sirohydrochlorin ferrochelatase (EC 4.99.1.4)
Locus tag: Sca_1898
Name: sirA
Funciton: syroheme synthase
Locus tag: Sca_1897
Name: nasD
Funciton: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
Locus tag: Sca_1896
Name: nasE
Funciton: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
Locus tag: Sca_1895
Name: nasF
Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
nirR
Sirohydrochlorin ferrochelatase (EC 4.99.1.4)
sirA
syroheme synthase
nasD
Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
nasE
Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
nasF
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)

Position: -75
Score: 5.9
Sequence: TTGTGAAAGTATTCACAA
Locus tag: Sca_1814
Name: nirC
Funciton: Formate/nitrite family of transporters
nirC
Formate/nitrite family of transporters

Position: -55
Score: 5.5
Sequence: ATGTGAAATAAATCATAT
Locus tag: Sca_1369
Name: ldh
Funciton: L-lactate dehydrogenase (EC:1.1.1.27)
ldh
L-lactate dehydrogenase (EC:1.1.1.27)

Position: -85
Score: 5.9
Sequence: ATGTGAATTAATTCACAT
Locus tag: Sca_1867
Name: lctP
Funciton: L-lactate permease
lctP
L-lactate permease

Position: -81
Score: 6
Sequence: TTGTGAATATATTCACAT
Locus tag: Sca_2121
Name: ddh
Funciton: D-lactate dehydrogenase (EC 1.1.1.28)
ddh
D-lactate dehydrogenase (EC 1.1.1.28)

Position: -74
Score: 5.5
Sequence: ATGTGATTTTAATCACAT
Locus tag: Sca_2085
Name: arcA
Funciton: Arginine deiminase (EC 3.5.3.6)
Locus tag: Sca_2084
Name: arcD
Funciton: Arginine/ornithine antiporter ArcD
Locus tag: Sca_2083
Name: arcR
Funciton: Transcriptional regulator ArcR essential for anaerobic expression of the ADI pathway, Crp/Fnr family
arcA
Arginine deiminase (EC 3.5.3.6)
arcD
Arginine/ornithine antiporter ArcD
arcR
Transcriptional regulator ArcR essential for anaerobic expression of the ADI pathway, Crp/Fnr family
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