Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of Rex in Staphylococcus aureus subsp. aureus N315

Properties
Regulator type: Transcription factor
TF locus tag: SA1851
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Regulog: Rex - Staphylococcaceae
Statistics of regulated genes:
- Genes 33
- Operons 17
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 74 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -79
Score: 4.9
Sequence: CTGTGATTTTTTACACAA
Locus tag: SA0017
Name: vicR
Funciton: cell wall homeostasis regulation two-component system, response regulator
Locus tag: SA0018
Name: vicK
Funciton: cell wall homeostasis regulation two-component system, sensor kinase
vicR
cell wall homeostasis regulation two-component system, response regulator
vicK
cell wall homeostasis regulation two-component system, sensor kinase

Position: -103
Score: 5.6
Sequence: TTGAGAATTTTTTCACAA
Locus tag: SA1323
Name: srrA
Funciton: Staphylococcal respiratory response protein SrrA
Locus tag: SA1322
Name: srrB
Funciton: Staphylococcal respiratory response protein SrrB
srrA
Staphylococcal respiratory response protein SrrA
srrB
Staphylococcal respiratory response protein SrrB

Position: -129
Score: 5.7
Sequence: TTGTGAAATACATCACAA
Locus tag: SA2268
Name: null
Funciton: conserved hypothetical protein
conserved hypothetical protein

Position: -96
Score: 6
Sequence: ATGTGAAAAAAATCACAA
Locus tag: SA0218
Name: pflB
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
Locus tag: SA0219
Name: pflA
Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
pflB
Pyruvate formate-lyase (EC 2.3.1.54)
pflA
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)

Position: -64
Score: 5.3
Sequence: ATGTGATTCTTTTCACAA
Locus tag: SA2189
Name: nirR
Funciton: Sirohydrochlorin ferrochelatase (EC 4.99.1.4)
Locus tag: SA2188
Name: nasD
Funciton: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
Locus tag: SA2187
Name: nasE
Funciton: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
Locus tag: SA2186
Name: nasF
Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
nirR
Sirohydrochlorin ferrochelatase (EC 4.99.1.4)
nasD
Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
nasE
Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
nasF
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)

Position: -72
Score: 6.2
Sequence: TTGTGAAATTATTCACAA
Locus tag: SA0293
Name: nirC
Funciton: Formate/nitrite family of transporters
nirC
Formate/nitrite family of transporters

Position: -168
Score: 4.6
Sequence: ATGTTCACTTTTTCACAA
Locus tag: SA2176
Name: narK
Funciton: nitrate-nitrite antiporter
narK
nitrate-nitrite antiporter

Position: -107
Score: 5.5
Sequence: TTGTGAAAAAATGTACAA
Locus tag: SA2185
Name: narG
Funciton: Respiratory nitrate reductase alpha chain (EC 1.7.99.4)
Locus tag: SA2184
Name: narH
Funciton: Respiratory nitrate reductase beta chain (EC 1.7.99.4)
Locus tag: SA2183
Name: narJ
Funciton: Respiratory nitrate reductase delta chain (EC 1.7.99.4)
Locus tag: SA2182
Name: narI
Funciton: Respiratory nitrate reductase gamma chain (EC 1.7.99.4)
Locus tag: SA2181
Name: nreA
Funciton: control of nitrate reduction protein NreA
Locus tag: SA2180
Name: nreB
Funciton: nitrate respiration regulation two-component system, sensor histidine kinase NreB
Locus tag: SA2179
Name: nreC
Funciton: two-component response regulator NreC
narG
Respiratory nitrate reductase alpha chain (EC 1.7.99.4)
narH
Respiratory nitrate reductase beta chain (EC 1.7.99.4)
narJ
Respiratory nitrate reductase delta chain (EC 1.7.99.4)
narI
Respiratory nitrate reductase gamma chain (EC 1.7.99.4)
nreA
control of nitrate reduction protein NreA
nreB
nitrate respiration regulation two-component system, sensor histidine kinase NreB
nreC
two-component response regulator NreC

Position: -124
Score: 6
Sequence: TTGTGAAAAAAATCACAT
Locus tag: SA2156
Name: lctP
Funciton: L-lactate permease
lctP
L-lactate permease

Position: -227
Score: 6
Sequence: ATGTGAAATAAATCACAA
Position: -169
Score: 6
Sequence: ATGTGAAATAAATCACAA
Locus tag: SA0232
Name: ldh
Funciton: L-lactate dehydrogenase (EC:1.1.1.27)
ldh
L-lactate dehydrogenase (EC:1.1.1.27)

Position: -363
Score: 5.7
Sequence: TTGTGATTTATTTCACAT
Locus tag: SA0231
Name: hmp
Funciton: Nitric oxide dioxygenase (EC 1.14.12.17)
hmp
Nitric oxide dioxygenase (EC 1.14.12.17)

Position: -185
Score: 6
Sequence: TTGTGAAAAATATCACAA
Locus tag: SA2311
Name: frp
Funciton: NAD(P)H-flavin oxidoreductase
frp
NAD(P)H-flavin oxidoreductase

Position: -39
Score: 5.9
Sequence: TTGTGATATTTTTCACAA
Locus tag: SA2312
Name: ddh
Funciton: D-lactate dehydrogenase (EC 1.1.1.28)
ddh
D-lactate dehydrogenase (EC 1.1.1.28)

Position: -79
Score: 5.8
Sequence: ATGTGAATATAATCACAT
Locus tag: SA2428
Name: arcA
Funciton: Arginine deiminase (EC 3.5.3.6)
Locus tag: SA2427
Name: arcB
Funciton: Ornithine carbamoyltransferase (EC 2.1.3.3)
Locus tag: SA2426
Name: arcD
Funciton: Arginine/ornithine antiporter ArcD
Locus tag: SA2425
Name: arcC
Funciton: Carbamate kinase (EC 2.7.2.2)
Locus tag: SA2424
Name: arcR
Funciton: Transcriptional regulator ArcR essential for anaerobic expression of the ADI pathway, Crp/Fnr family
arcA
Arginine deiminase (EC 3.5.3.6)
arcB
Ornithine carbamoyltransferase (EC 2.1.3.3)
arcD
Arginine/ornithine antiporter ArcD
arcC
Carbamate kinase (EC 2.7.2.2)
arcR
Transcriptional regulator ArcR essential for anaerobic expression of the ADI pathway, Crp/Fnr family

Position: -38
Score: 6.2
Sequence: TTGTGAAATTATTCACAA
Locus tag: SA1272
Name: ald1
Funciton: Alanine dehydrogenase (EC 1.4.1.1)
ald1
Alanine dehydrogenase (EC 1.4.1.1)

Position: -39
Score: 6.3
Sequence: TTGTGAAATAATTCACAA
Locus tag: SA0143
Name: adhE
Funciton: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)
adhE
Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)

Position: -306
Score: 6
Sequence: TTGTGAATTAATTCACAT
Locus tag: SA0562
Name: adh1/adhB
Funciton: Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent
adh1/adhB
Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent
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