Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of RbkR in Pyrobaculum calidifontis JCM 11548

Properties
Regulator type: Transcription factor
TF locus tag: Pcal_1071
Regulator family: [Other]
Regulation mode:
Biological process: Riboflavin biosynthesis
Effector: Flavin mononucleotide
Regulog: RbkR - Thermoproteales
Statistics of regulated genes:
- Genes 4
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 23 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -51
Score: 6.1
Sequence: TGTAAAAAATAGTTTACA
Position: -19
Score: 3.9
Sequence: CCTCACCTAGAGTTGACA
Locus tag: Pcal_1121
Name: ribB
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase

Position: -50
Score: 4.2
Sequence: TGTAAACTCTTGGAGACT
Locus tag: Pcal_1124
Name: arfB
Funciton: Formamide hydrolase
arfB
Formamide hydrolase

Position: -54
Score: 4.2
Sequence: AGTCTCCAAGAGTTTACA
Locus tag: Pcal_1123
Name: arfA
Funciton: GTP cyclohydrolase III (EC 3.5.4.29)
Locus tag: Pcal_1122
Name: arfC
Funciton: 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate reductase
arfA
GTP cyclohydrolase III (EC 3.5.4.29)
arfC
2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate reductase
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD