Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of RbkR in Metallosphaera sedula DSM 5348

Properties
Regulator type: Transcription factor
TF locus tag: Msed_1737
Regulator family: [Other]
Regulation mode:
Biological process: Riboflavin biosynthesis
Effector: Flavin mononucleotide
Regulog: RbkR - Sulfolobales
Statistics of regulated genes:
- Genes 6
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 12 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -47
Score: 4.3
Sequence: AGGAGTAGATACTAAA
Position: -20
Score: 4.7
Sequence: TTTGGTATTTACCAAT
Locus tag: Msed_0426
Name: ribT
Funciton: Predicted riboflavin transporter ribT
ribT
Predicted riboflavin transporter ribT

Position: -42
Score: 5.2
Sequence: ATTAGTATATACGCTT
Locus tag: Msed_0046
Name: ribB
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
Locus tag: Msed_0047
Name: ribE
Funciton: Riboflavin synthase archaeal (EC 2.5.1.9)
Locus tag: Msed_0048
Name: ribH
Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
Locus tag: Msed_0049
Name: arfA
Funciton: GTP cyclohydrolase III (EC 3.5.4.29)
Locus tag: Msed_0050
Name: pyrD
Funciton: Pyrimidine deaminase archaeal predicted (EC 3.5.4.26)
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase
ribE
Riboflavin synthase archaeal (EC 2.5.1.9)
ribH
6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
arfA
GTP cyclohydrolase III (EC 3.5.4.29)
pyrD
Pyrimidine deaminase archaeal predicted (EC 3.5.4.26)
Export
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