Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of ArgR in Staphylococcus carnosus subsp. carnosus TM300

Properties
Regulator type: Transcription factor
TF locus tag: Sca_1144
Regulator family: ArgR
Regulation mode: repressor
Biological process: Arginine biosynthesis; Arginine degradation
Effector: Arginine
Regulog: ArgR - Staphylococcaceae
Statistics of regulated genes:
- Genes 10
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 65 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -282
Score: 4.9
Sequence: AAGAATAATTATACAA
Position: -176
Score: 5.1
Sequence: ATATATATTTATTCAT
Position: -132
Score: 4.5
Sequence: TTGCATTATTATAAAT
Locus tag: Sca_2165
Name: cudT
Funciton: choline transporter
cudT
choline transporter

Position: -56
Score: 4.4
Sequence: TTGCATATTAATACGT
Position: -36
Score: 4.2
Sequence: ATGTATAATAATTCTG
Locus tag: Sca_1432
Name: artPQ
Funciton: Arginine ABC transporter, substrate-binding and permease protein
Locus tag: Sca_1431
Name: artM
Funciton: Arginine ABC transporter, ATP-binding protein
artPQ
Arginine ABC transporter, substrate-binding and permease protein
artM
Arginine ABC transporter, ATP-binding protein

Position: -34
Score: 5.3
Sequence: ATGTATAAATATTCGT
Locus tag: Sca_1144
Name: argR
Funciton: arginine repressor
Locus tag: Sca_1143
Name: recN
Funciton: DNA repair protein
argR
arginine repressor
recN
DNA repair protein

Position: -99
Score: 4.3
Sequence: TTGTATATTTATGTAA
Locus tag: Sca_0569
Name: argG
Funciton: argininosuccinate synthase
Locus tag: Sca_0568
Name: argH
Funciton: argininosuccinate lyase
argG
argininosuccinate synthase
argH
argininosuccinate lyase

Position: -314
Score: 4.8
Sequence: ATAAATTAATATTCAT
Locus tag: Sca_2085
Name: arcA
Funciton: arginine deiminase
Locus tag: Sca_2084
Name: arcD
Funciton: arginine/ornithine antiporter
Locus tag: Sca_2083
Name: arcR
Funciton: transcription regulator of arginine catabolism, Crp/Fnr family
arcA
arginine deiminase
arcD
arginine/ornithine antiporter
arcR
transcription regulator of arginine catabolism, Crp/Fnr family
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD