Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of YrdX in Polaromonas naphthalenivorans CJ2

Properties
Regulator type: Transcription factor
TF locus tag: Pnap_2106
Regulator family: GntR/MocR
Regulation mode:
Biological process:
Effector:
Regulog: YrdX - Comamonadaceae
Statistics of regulated genes:
- Genes 6
- Operons 1
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 11 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -324
Score: 6.6
Sequence: CTTGATTG-(5)-CTTGATTG
Position: -320
Score: 5.1
Sequence: ATTGCATG-(5)-ATTGCATT
Position: -224
Score: 6.1
Sequence: GTTTATCG-(5)-ATTGATTG
Position: -105
Score: 6.6
Sequence: ATTGATTG-(3)-CTTGATTG
Locus tag: Pnap_2105
Name: PF02635
Funciton: probable GTP cyclohydrolase II/ATPase/Sulphur relay, DsrE/F-like protein
Locus tag: Pnap_2104
Name: COG388
Funciton: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (EC 3.5.5.7)
Locus tag: Pnap_2103
Name: COG2516
Funciton: Biotin synthase-related radical SAM domain protein
Locus tag: Pnap_2102
Name: COG3153
Funciton: GCN5-related N-acetyltransferase
Locus tag: Pnap_2101
Name: COG2144
Funciton: AIR synthase related protein/Selenophosphate synthetase-related
Locus tag: Pnap_2100
Name: COG438 (RfaG)
Funciton: Glycosyltransferase
PF02635
probable GTP cyclohydrolase II/ATPase/Sulphur relay, DsrE/F-like protein
COG388
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (EC 3.5.5.7)
COG2516
Biotin synthase-related radical SAM domain protein
COG3153
GCN5-related N-acetyltransferase
COG2144
AIR synthase related protein/Selenophosphate synthetase-related
COG438 (RfaG)
Glycosyltransferase
Export
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