Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of Rex in Streptomyces scabiei 87.22

Properties
Regulator type: Transcription factor
TF locus tag: SCAB_39091
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Regulog: Rex - Streptomycetaceae
Statistics of regulated genes:
- Genes 37
- Operons 8
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 36 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -94
Score: 6
Sequence: TTGTGCACGCGTTCACAA
Locus tag: SCAB_39091
Name: rex
Funciton: Redox-sensitive transcriptional regulator Rex
Locus tag: SCAB_39081
Name: hemA
Funciton: Glutamyl-tRNA reductase (EC 1.2.1.70)
Locus tag: SCAB_39071
Name: hemC
Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: SCAB_39061
Name: hemD
Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)
rex
Redox-sensitive transcriptional regulator Rex
hemA
Glutamyl-tRNA reductase (EC 1.2.1.70)
hemC
Porphobilinogen deaminase (EC 2.5.1.61)
hemD
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)

Position: -211
Score: 4.9
Sequence: TCGTGAAGGAATTCACGA
Locus tag: SCAB_40831
Name: hppA
Funciton: Pyrophosphate-energized proton pump (EC 3.6.1.1)
hppA
Pyrophosphate-energized proton pump (EC 3.6.1.1)

Position: -60
Score: 5.5
Sequence: TCGTGAAAGCGTTCACAT
Locus tag: SCAB_30131
Name: whiE
Funciton: WhiB-family transcriptional regulator involved in differentiation and sporulation
whiE
WhiB-family transcriptional regulator involved in differentiation and sporulation

Position: -142
Score: 5.1
Sequence: TTGTGATACGGTTCACGA
Locus tag: SCAB_28831
Name: atpI
Funciton: ATP synthase protein I
Locus tag: SCAB_28821
Name: atpB
Funciton: ATP synthase A chain (EC 3.6.3.14)
Locus tag: SCAB_28811
Name: atpE
Funciton: ATP synthase C chain (EC 3.6.3.14)
Locus tag: SCAB_28801
Name: atpF
Funciton: ATP synthase B chain (EC 3.6.3.14)
Locus tag: SCAB_28791
Name: atpH
Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: SCAB_28781
Name: atpA
Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: SCAB_28771
Name: atpG
Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: SCAB_28761
Name: atpD
Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: SCAB_28751
Name: atpC
Funciton: ATP synthase epsilon chain (EC 3.6.3.14)
atpI
ATP synthase protein I
atpB
ATP synthase A chain (EC 3.6.3.14)
atpE
ATP synthase C chain (EC 3.6.3.14)
atpF
ATP synthase B chain (EC 3.6.3.14)
atpH
ATP synthase delta chain (EC 3.6.3.14)
atpA
ATP synthase alpha chain (EC 3.6.3.14)
atpG
ATP synthase gamma chain (EC 3.6.3.14)
atpD
ATP synthase beta chain (EC 3.6.3.14)
atpC
ATP synthase epsilon chain (EC 3.6.3.14)

Position: -49
Score: 3.9
Sequence: ATGCGAAACTTTTCACAT
Locus tag: SCAB_38661
Name: resA
Funciton: Thiol:disulfide oxidoreductase related to ResA
Locus tag: SCAB_38651
Name: ccdA
Funciton: Cytochrome c-type biogenesis protein CcdA (DsbD analog)
Locus tag: SCAB_38641
Name: resB
Funciton: Ccs1/ResB-related putative cytochrome C-type biogenesis protein
Locus tag: SCAB_38631
Name: resC
Funciton: Cytochrome c-type biogenesis protein CcsA/ResC
resA
Thiol:disulfide oxidoreductase related to ResA
ccdA
Cytochrome c-type biogenesis protein CcdA (DsbD analog)
resB
Ccs1/ResB-related putative cytochrome C-type biogenesis protein
resC
Cytochrome c-type biogenesis protein CcsA/ResC

Position: -127
Score: 5.4
Sequence: TTGTGACCTGCTTCACAT
Locus tag: SCAB_38091
Name: nuoA
Funciton: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
Locus tag: SCAB_38081
Name: nuoB
Funciton: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
Locus tag: SCAB_38071
Name: nuoC
Funciton: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
Locus tag: SCAB_38061
Name: nuoD
Funciton: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
Locus tag: SCAB_38051
Name: nuoE
Funciton: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
Locus tag: SCAB_38041
Name: nuoF
Funciton: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
Locus tag: SCAB_38031
Name: nuoG
Funciton: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
Locus tag: SCAB_38021
Name: nuoH
Funciton: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
Locus tag: SCAB_38011
Name: nuoI
Funciton: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
Locus tag: SCAB_38001
Name: nuoJ
Funciton: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
Locus tag: SCAB_37991
Name: nuoK
Funciton: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
Locus tag: SCAB_37981
Name: nuoL
Funciton: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
Locus tag: SCAB_37971
Name: nuoM
Funciton: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
Locus tag: SCAB_37961
Name: nuoN
Funciton: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
nuoA
NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
nuoB
NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
nuoC
NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
nuoD
NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
nuoE
NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
nuoF
NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
nuoG
NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
nuoH
NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
nuoI
NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
nuoJ
NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
nuoK
NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
nuoL
NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
nuoM
NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
nuoN
NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)

Position: -95
Score: 5.7
Sequence: ATGTGAATGCATTCACAA
Locus tag: SCAB_46401
Name: cydA
Funciton: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
Locus tag: SCAB_46411
Name: cydB
Funciton: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)
Locus tag: SCAB_46421
Name: cydCD
Funciton: ABC transporter permease CydC / ATP-binding protein CydD
cydA
Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
cydB
Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)
cydCD
ABC transporter permease CydC / ATP-binding protein CydD

Position: -52
Score: 5.2
Sequence: TTGTGAAGGGGCGCACGA
Locus tag: SCAB_54481
Name: ndh
Funciton: NADH dehydrogenase (EC 1.6.99.3)
ndh
NADH dehydrogenase (EC 1.6.99.3)
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