Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of Rex in Rhodococcus erythropolis PR4

Properties
Regulator type: Transcription factor
TF locus tag: RER_16400
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Regulog: Rex - Nocardiaceae
Statistics of regulated genes:
- Genes 9
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 22 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -69
Score: 5.7
Sequence: TTGTGGTGGTAGTCACAA
Locus tag: RER_19350
Name: choD
Funciton: Cholesterol oxidase (EC 1.1.3.6)
choD
Cholesterol oxidase (EC 1.1.3.6)

Position: -106
Score: 6.3
Sequence: TCGTGAAAGCATTCACAA
Locus tag: RER_21900
Name: whiB
Funciton: WhiB-family transcriptional regulator involved in differentiation and sporulation
whiB
WhiB-family transcriptional regulator involved in differentiation and sporulation

Position: -89
Score: 4.5
Sequence: TTGTGACTGTCGTCACGG
Locus tag: RER_16190
Name: fadD
Funciton: Long-chain-fatty-acid--CoA ligase (EC: 6.2.1.3 )
Locus tag: RER_16200
Name: gpm
Funciton: Phosphoglycerate mutase (EC 5.4.2.1)
fadD
Long-chain-fatty-acid--CoA ligase (EC: 6.2.1.3 )
gpm
Phosphoglycerate mutase (EC 5.4.2.1)

Position: -127
Score: 5.8
Sequence: TTGTGCATGGGTTCACAA
Locus tag: RER_16400
Name: rex
Funciton: Redox-sensitive transcriptional regulator Rex
Locus tag: RER_16410
Name: hemA
Funciton: Glutamyl-tRNA reductase (EC 1.2.1.70)
Locus tag: RER_16420
Name: hemC
Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: RER_16430
Name: hemD
Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: RER_16440
Name: hemB
Funciton: Porphobilinogen synthase (EC 4.2.1.24)
rex
Redox-sensitive transcriptional regulator Rex
hemA
Glutamyl-tRNA reductase (EC 1.2.1.70)
hemC
Porphobilinogen deaminase (EC 2.5.1.61)
hemD
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)
hemB
Porphobilinogen synthase (EC 4.2.1.24)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD