Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of GguR in Polaromonas naphthalenivorans CJ2

Properties
Regulator type: Transcription factor
TF locus tag: Pnap_1590
Regulator family: GntR/Others
Regulation mode:
Biological process: Glucarate utilization; Galactarate utilization; Galacturonate utilization; Glucuronate utilization
Effector:
Regulog: GguR - Comamonadaceae
Statistics of regulated genes:
- Genes 12
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 32 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -58
Score: 4.7
Sequence: ACGTTGTCTGATGACTC
Locus tag: Pnap_1590
Name: gguR
Funciton: Predicted D-glucarate or D-galactorate utilization regulator, GntR family
gguR
Predicted D-glucarate or D-galactorate utilization regulator, GntR family

Position: -98
Score: 4.7
Sequence: GAGTCATCAGACAACGT
Locus tag: Pnap_1591
Name: udh
Funciton: Uronate dehydrogenase (EC 1.1.1.203)
Locus tag: Pnap_1592
Name: uxuL1
Funciton: Predicted glucuronolactone/galactarolactone lactonase
Locus tag: Pnap_1593
Name: uxuP
Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, periplasmic component
Locus tag: Pnap_1594
Name: uxuQ
Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, small permease component
Locus tag: Pnap_1595
Name: uxuM
Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, large permease component
Locus tag: Pnap_1596
Name: kdgD
Funciton: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
Locus tag: Pnap_1597
Name: garD
Funciton: D-galactarate dehydratase (EC 4.2.1.42)
Locus tag: Pnap_1598
Name: kgsD
Funciton: Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
Locus tag: Pnap_1599
Name: garL
Funciton: 2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20)
Locus tag: Pnap_1600
Name: garR
Funciton: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)
Locus tag: Pnap_1601
Name: tctC1
Funciton: Tripartite tricarboxylate transporter family receptor, putative transporter for uronates
udh
Uronate dehydrogenase (EC 1.1.1.203)
uxuL1
Predicted glucuronolactone/galactarolactone lactonase
uxuP
Predicted glucuronate /galacturonate TRAP-type transporter, periplasmic component
uxuQ
Predicted glucuronate /galacturonate TRAP-type transporter, small permease component
uxuM
Predicted glucuronate /galacturonate TRAP-type transporter, large permease component
kdgD
5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
garD
D-galactarate dehydratase (EC 4.2.1.42)
kgsD
Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
garL
2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20)
garR
2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)
tctC1
Tripartite tricarboxylate transporter family receptor, putative transporter for uronates
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD