Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of UxuR3 in Polaromonas sp. JS666

Properties
Regulator type: Transcription factor
TF locus tag: Bpro_3977
Regulator family: GntR/Others
Regulation mode:
Biological process: Glucuronate utilization
Effector:
Regulog: UxuR3 - Comamonadaceae
Statistics of regulated genes:
- Genes 9
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 9 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -240
Score: 5.1
Sequence: ATAGTGGTAAACCACTAA
Position: -217
Score: 5.9
Sequence: AAATTGGTATACCACTTA
Position: -61
Score: 5.1
Sequence: TAATTGGTAAACCATCTT
Locus tag: Bpro_3977
Name: uxuR3
Funciton: Predicted transcriptional regulator for glucuronate utilization, GntR family
Locus tag: Bpro_3978
Name: Bpro_3978
Funciton: Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein
uxuR3
Predicted transcriptional regulator for glucuronate utilization, GntR family
Bpro_3978
Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein

Position: -297
Score: 5.1
Sequence: AAGATGGTTTACCAATTA
Position: -141
Score: 5.9
Sequence: TAAGTGGTATACCAATTT
Position: -118
Score: 5.1
Sequence: TTAGTGGTTTACCACTAT
Locus tag: Bpro_3976
Name: COG0834
Funciton: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Locus tag: Bpro_3975
Name: COG0765
Funciton: ABC-type amino acid transport system, permease component
Locus tag: Bpro_3974
Name: COG0765-2
Funciton: ABC-type amino acid transport system, permease component
Locus tag: Bpro_3973
Name: COG1126
Funciton: ABC-type polar amino acid transport system, ATPase component
Locus tag: Bpro_3972
Name: COG2055
Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: Bpro_3971
Name: COG2706
Funciton: 3-carboxymuconate cyclase
Locus tag: Bpro_3970
Name: uxuA
Funciton: D-mannonate oxidoreductase (EC 1.1.1.57)
COG0834
ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
COG0765
ABC-type amino acid transport system, permease component
COG0765-2
ABC-type amino acid transport system, permease component
COG1126
ABC-type polar amino acid transport system, ATPase component
COG2055
Malate dehydrogenase (EC 1.1.1.37)
COG2706
3-carboxymuconate cyclase
uxuA
D-mannonate oxidoreductase (EC 1.1.1.57)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD