Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of TyrR in Photobacterium profundum SS9

Properties
Regulator type: Transcription factor
TF locus tag: PBPRA2434
Regulator family: TyrR
Regulation mode: activator (repressor)
Biological process: Aromatic amino acid metabolism
Effector: Tyrosine; Phenylalanine
Regulog: TyrR - Vibrionales
Statistics of regulated genes:
- Genes 11
- Operons 6
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 83 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -106
Score: 5.7
Sequence: ATGTAAAAAAATCATTACAG
Locus tag: PBPRA0794
Name: COG1284
Funciton: Conserved hypothetical protein
COG1284
Conserved hypothetical protein

Position: -171
Score: 5.2
Sequence: GTGTAAACTTAAGTTTACGA
Locus tag: PBPRA3026
Name: aroF
Funciton: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54)
Locus tag: PBPRA3025
Name: tyrA
Funciton: Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43)
aroF
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54)
tyrA
Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43)

Position: -74
Score: 5.4
Sequence: CTGTACATAATAGTTTACAG
Locus tag: PBPRA2512
Name: COG0733
Funciton: Predicted 4-Hydroxyphenylpyruvate transporter, SNF family
COG0733
Predicted 4-Hydroxyphenylpyruvate transporter, SNF family

Position: -243
Score: 5.7
Sequence: ATGTAAAATTTATGTTACAC
Locus tag: PBPRB1164
Name: phhA
Funciton: Phenylalanine-4-hydroxylase (EC 1.14.16.1)
Locus tag: PBPRB1163
Name: phhB
Funciton: Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96)
phhA
Phenylalanine-4-hydroxylase (EC 1.14.16.1)
phhB
Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96)

Position: -321
Score: 5.7
Sequence: GTGTAACATAAATTTTACAT
Position: -164
Score: 4.3
Sequence: ATGTAAAATATTCAACACAC
Locus tag: PBPRB1165
Name: hmgA
Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
Locus tag: PBPRB1166
Name: hmgC
Funciton: Fumarylacetoacetase (EC 3.7.1.2)
Locus tag: PBPRB1167
Name: hmgB
Funciton: Maleylacetoacetate isomerase (EC 5.2.1.2)
Locus tag: PBPRB1168
Name: acsA
Funciton: Acetoacetyl-CoA synthetase (EC 6.2.1.16)
hmgA
Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
hmgC
Fumarylacetoacetase (EC 3.7.1.2)
hmgB
Maleylacetoacetate isomerase (EC 5.2.1.2)
acsA
Acetoacetyl-CoA synthetase (EC 6.2.1.16)

Position: -224
Score: 6
Sequence: ATGTAAATATAAGTTTACAT
Position: -37
Score: 4.5
Sequence: GTGTAAAGTTTTATGAACAT
Locus tag: PBPRA2465
Name: tyrP
Funciton: tyrosine-specific transport protein
tyrP
tyrosine-specific transport protein
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