Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of LexA in Mycobacterium marinum M

Properties
Regulator type: Transcription factor
TF locus tag: MMAR_1992
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Mycobacteriaceae
Statistics of regulated genes:
- Genes 13
- Operons 9
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 83 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -28
Score: 5.4
Sequence: TCGAACATATTTTCGA
Locus tag: MMAR_1158
Name: dnaE2
Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
dnaE2
DNA polymerase III alpha subunit (EC 2.7.7.7)

Position: -8
Score: 5.9
Sequence: TCGAACACATGTTCGA
Locus tag: MMAR_1584
Name: Rv3074
Funciton: Conserved hypothetical protein
Rv3074
Conserved hypothetical protein

Position: -8
Score: 5.1
Sequence: TCGAATGTATGTTCGA
Locus tag: MMAR_5187
Name: Rv0336
Funciton: Conserved hypothetical protein
Rv0336
Conserved hypothetical protein

Position: -8
Score: 5.2
Sequence: TCGAACTGATGTGCGA
Locus tag: MMAR_4493
Name: alkB
Funciton: DNA repair system specific for alkylated DNA
alkB
DNA repair system specific for alkylated DNA

Position: -25
Score: 5.4
Sequence: TCGAACTAGTGTTCGA
Locus tag: MMAR_2148
Name: splB
Funciton: DNA repair photolyase
splB
DNA repair photolyase

Position: -46
Score: 5.3
Sequence: TCGAACAATTGTTCGG
Locus tag: MMAR_2109
Name: ruvC
Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: MMAR_2110
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: MMAR_2111
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvC
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
ruvA
Holliday junction DNA helicase RuvA
ruvB
Holliday junction DNA helicase RuvB

Position: -51
Score: 5.2
Sequence: TCGAACATACTTTCGA
Locus tag: MMAR_1150
Name: Rv3395c
Funciton: Recombinase-like hypothetical protein
Locus tag: MMAR_1151
Name: COG0389
Funciton: DNA polymerase-like protein PA0670
Rv3395c
Recombinase-like hypothetical protein
COG0389
DNA polymerase-like protein PA0670

Position: -121
Score: 5.5
Sequence: TCGAACAGATGTTCGG
Locus tag: MMAR_1977
Name: recA
Funciton: Recombinase A
Locus tag: MMAR_1978
Name: recX
Funciton: Regulatory protein RecX
recA
Recombinase A
recX
Regulatory protein RecX

Position: -282
Score: 5.1
Sequence: TCGCTCAAGTGTTCGA
Position: -258
Score: 5.2
Sequence: TCGCTCACGTGTTCGA
Position: -48
Score: 5.6
Sequence: TCGAACACATGTTTGA
Locus tag: MMAR_1992
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD