Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of LexA in Saccharomonospora viridis DSM 43017

Properties
Regulator type: Transcription factor
TF locus tag: Svir_27590
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Frankineae/Propionibacterineae/Pseudonocardiaceae
Statistics of regulated genes:
- Genes 9
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 68 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -24
Score: 4.6
Sequence: TCGAACAGTTGACCGA
Locus tag: Svir_08220
Name: gyrB
Funciton: Topoisomerase IV, subunit B (EC 5.99.1.-)
Locus tag: Svir_08230
Name: gyrA
Funciton: Topoisomerase IV, subunit A (EC 5.99.1.-)
gyrB
Topoisomerase IV, subunit B (EC 5.99.1.-)
gyrA
Topoisomerase IV, subunit A (EC 5.99.1.-)

Position: -165
Score: 5.4
Sequence: TCGAACACCCGTGCGA
Position: -102
Score: 5.1
Sequence: TCGAACAAACGTTTGA
Locus tag: Svir_27590
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)

Position: -168
Score: 5.7
Sequence: TCGAACAGGTGTTCGG
Locus tag: Svir_27820
Name: recA
Funciton: Recombinase A
Locus tag: Svir_27810
Name: recX
Funciton: Regulatory protein RecX
recA
Recombinase A
recX
Regulatory protein RecX

Position: -33
Score: 5
Sequence: TCGAACTGGTGTTCGC
Locus tag: Svir_15060
Name: ruvC
Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: Svir_15070
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: Svir_15080
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvC
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
ruvA
Holliday junction DNA helicase RuvA
ruvB
Holliday junction DNA helicase RuvB

Position: -44
Score: 5.9
Sequence: TCGAACAGGCGTTCGA
Locus tag: Svir_39470
Name: dnaB
Funciton: Replicative DNA helicase (EC 3.6.1.-)
dnaB
Replicative DNA helicase (EC 3.6.1.-)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD