Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of LexA in Nakamurella multipartita DSM 44233

Properties
Regulator type: Transcription factor
TF locus tag: Namu_3979
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Frankineae/Propionibacterineae/Pseudonocardiaceae
Statistics of regulated genes:
- Genes 9
- Operons 6
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 68 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -202
Score: 5.1
Sequence: TCGAACGGACGTTCTA
Position: -186
Score: 4.4
Sequence: TCGAACGTCTGCACGA
Position: -123
Score: 5.5
Sequence: TCGAACGGGTGTTTGA
Locus tag: Namu_3979
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)

Position: -49
Score: 4
Sequence: GTGGACACCCGTTCGG
Locus tag: Namu_3157
Name: PF02720
Funciton: HNH endonuclease
PF02720
HNH endonuclease

Position: -77
Score: 5.2
Sequence: CCGAACAGGTGATCGA
Locus tag: Namu_1258
Name: uvrD
Funciton: ATP-dependent DNA helicase II
uvrD
ATP-dependent DNA helicase II

Position: -98
Score: 4.5
Sequence: CAGAACACATGTCCGA
Locus tag: Namu_5363
Name: dnaB
Funciton: Replicative DNA helicase (EC 3.6.1.-)
dnaB
Replicative DNA helicase (EC 3.6.1.-)

Position: -85
Score: 4
Sequence: CTGGACAGGTGTTCGC
Locus tag: Namu_3396
Name: ruvC
Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: Namu_3395
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: Namu_3394
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvC
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
ruvA
Holliday junction DNA helicase RuvA
ruvB
Holliday junction DNA helicase RuvB

Position: -284
Score: 3.9
Sequence: TCGATCAGGCGCTGGA
Position: -132
Score: 5
Sequence: TCGAACAGGTGTACGT
Locus tag: Namu_3994
Name: recA
Funciton: Recombinase A
Locus tag: Namu_3993
Name: recX
Funciton: Regulatory protein RecX
recA
Recombinase A
recX
Regulatory protein RecX
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD