Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of LexA in Frankia sp. EAN1pec

Properties
Regulator type: Transcription factor
TF locus tag: Franean1_1232
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Frankineae/Propionibacterineae/Pseudonocardiaceae
Statistics of regulated genes:
- Genes 13
- Operons 9
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 68 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -75
Score: 3.7
Sequence: CCGTTCGGGTGTTCTG
Locus tag: Franean1_3452
Name: PF02720
Funciton: HNH endonuclease
PF02720
HNH endonuclease

Position: -22
Score: 5.1
Sequence: TCGAACGTACGATCGA
Locus tag: Franean1_5987
Name: uvrD
Funciton: ATP-dependent DNA helicase II
uvrD
ATP-dependent DNA helicase II

Position: -137
Score: 5.8
Sequence: TCGAACATATGTTCGA
Locus tag: Franean1_7308
Name: dnaB
Funciton: Replicative DNA helicase (EC 3.6.1.-)
dnaB
Replicative DNA helicase (EC 3.6.1.-)

Position: -142
Score: 5.2
Sequence: TCGAACGAATGTTCGG
Locus tag: Franean1_6708
Name: recA
Funciton: Recombinase A
recA
Recombinase A

Position: -298
Score: 4.9
Sequence: TCGAACGCCTGAGCGA
Position: -244
Score: 5.4
Sequence: TCGAACAGACGTTTGA
Locus tag: Franean1_1232
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)

Position: -138
Score: 5.5
Sequence: TCGAACGGATGTTCGG
Locus tag: Franean1_1219
Name: recA
Funciton: Recombinase A
Locus tag: Franean1_1220
Name: recX
Funciton: Regulatory protein RecX
recA
Recombinase A
recX
Regulatory protein RecX

Position: -154
Score: 4.1
Sequence: CCGACCGTGCCTTCGA
Locus tag: Franean1_1158
Name: dprA
Funciton: DNA protecting protein DprA
Locus tag: Franean1_1159
Name: xerC
Funciton: Site-specific DNA-tyrosine recombinase, XerC
dprA
DNA protecting protein DprA
xerC
Site-specific DNA-tyrosine recombinase, XerC

Position: -227
Score: 5.4
Sequence: TCGAACGCGCGTTTGA
Locus tag: Franean1_2057
Name: uvrA
Funciton: Excinuclease ABC, subunit A
uvrA
Excinuclease ABC, subunit A

Position: -37
Score: 5.4
Sequence: TCGAACGGATGTTCGT
Locus tag: Franean1_5146
Name: ruvC
Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: Franean1_5145
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: Franean1_5144
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvC
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
ruvA
Holliday junction DNA helicase RuvA
ruvB
Holliday junction DNA helicase RuvB
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD