Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of MalR in Shewanella loihica PV-4

Properties
Regulator type: Transcription factor
TF locus tag: Shew_1870
Regulator family: LacI
Regulation mode: repressor
Biological process: Maltodextrin utilization
Effector: Maltose
Regulog: MalR - Shewanellaceae
Statistics of regulated genes:
- Genes 8
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 67 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -316
Score: 5.6
Sequence: GATGAATACGTATGTAAT
Locus tag: Shew_1874
Name: malT
Funciton: Predicted maltose transporter MalT
Locus tag: Shew_1873
Name: cga
Funciton: Glucoamylase (EC 3.2.1.3)
malT
Predicted maltose transporter MalT
cga
Glucoamylase (EC 3.2.1.3)

Position: -343
Score: 6.2
Sequence: ACTGCATACGTATGCAAA
Position: -192
Score: 6.1
Sequence: TTTGAATACGTATGCATA
Locus tag: Shew_1888
Name: omp(Mal)
Funciton: Predicted maltose-specific TonB-dependent receptor
Locus tag: Shew_1887
Name: susA
Funciton: Neopullulanase (EC 3.2.1.135)
Locus tag: Shew_1886
Name: amy2
Funciton: Alpha-amylase (EC 3.2.1.1)
omp(Mal)
Predicted maltose-specific TonB-dependent receptor
susA
Neopullulanase (EC 3.2.1.135)
amy2
Alpha-amylase (EC 3.2.1.1)

Position: -164
Score: 5.9
Sequence: GGTGAATACGTATGCAGC
Locus tag: Shew_1876
Name: susB
Funciton: Alpha-glucosidase (EC 3.2.1.20)
susB
Alpha-glucosidase (EC 3.2.1.20)

Position: -311
Score: 6.1
Sequence: TATGCATACGTATTCAAA
Position: -160
Score: 6.2
Sequence: TTTGCATACGTATGCAGT
Locus tag: Shew_1889
Name: malZ
Funciton: Maltodextrin glucosidase (EC 3.2.1.20)
Locus tag: Shew_1890
Name: glcP
Funciton: Predicted glucose transporter in maltodextrin utilization gene cluster
malZ
Maltodextrin glucosidase (EC 3.2.1.20)
glcP
Predicted glucose transporter in maltodextrin utilization gene cluster
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD