Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of Daci_3836 in Variovorax paradoxus S110

Properties
Regulator type: Transcription factor
TF locus tag: Vapar_0276
Regulator family: GntR/Others
Regulation mode:
Biological process:
Effector:
Regulog: Daci_3836 - Comamonadaceae
Statistics of regulated genes:
- Genes 10
- Operons 1
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 8 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -25
Score: 5
Sequence: ACTTGTACACAAGT
Locus tag: Vapar_0265
Name: uahA
Funciton: Allophanate hydrolase (EC 3.5.1.54)
Locus tag: Vapar_0266
Name: Vapar_0266
Funciton: ABC transporter substrate binding protein, periplasmic component
Locus tag: Vapar_0267
Name: Vapar_0267
Funciton: ABC transporter, permease protein
Locus tag: Vapar_0268
Name: Vapar_0268
Funciton: ABC transporter ATP-binding protein
Locus tag: Vapar_0269
Name: null
Funciton: hypothetical protein
Locus tag: Vapar_0270
Name: Lcho_3026
Funciton: ABC transporter, periplasmic ligand binding protein, Bmp family
Locus tag: Vapar_0271
Name: Lcho_3025
Funciton: ABC transporter, permease protein
Locus tag: Vapar_0272
Name: Lcho_3024
Funciton: ABC transporter, permease protein
Locus tag: Vapar_0273
Name: Lcho_3023
Funciton: Isochorismatase hydrolase (EC 3.3.2.1)
Locus tag: Vapar_0274
Name: Lcho_3022
Funciton: ABC transporter ATP-binding protein
uahA
Allophanate hydrolase (EC 3.5.1.54)
Vapar_0266
ABC transporter substrate binding protein, periplasmic component
Vapar_0267
ABC transporter, permease protein
Vapar_0268
ABC transporter ATP-binding protein
hypothetical protein
Lcho_3026
ABC transporter, periplasmic ligand binding protein, Bmp family
Lcho_3025
ABC transporter, permease protein
Lcho_3024
ABC transporter, permease protein
Lcho_3023
Isochorismatase hydrolase (EC 3.3.2.1)
Lcho_3022
ABC transporter ATP-binding protein
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD