Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of Daci_3836 in Leptothrix cholodnii SP-6

Properties
Regulator type: Transcription factor
TF locus tag: Lcho_3020
Regulator family: GntR/Others
Regulation mode:
Biological process:
Effector:
Regulog: Daci_3836 - Comamonadaceae
Statistics of regulated genes:
- Genes 12
- Operons 1
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 8 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: 13
Score: 4.7
Sequence: TGTTGTATACCAGT
Locus tag: Lcho_3031
Name: uahA
Funciton: Allophanate hydrolase (EC 3.5.1.54)
Locus tag: Lcho_3030
Name: null
Funciton: hypothetical protein
Locus tag: Lcho_3029
Name: null
Funciton: hypothetical protein
Locus tag: Lcho_3028
Name: gatA
Funciton: amidase AtzE family
Locus tag: Lcho_3027
Name: Lcho_3027
Funciton: putative protein for oxalurate utilization
Locus tag: Lcho_3026
Name: Lcho_3026
Funciton: ABC transporter, periplasmic ligand binding protein, Bmp family
Locus tag: Lcho_3025
Name: Lcho_3025
Funciton: ABC transporter, permease protein
Locus tag: Lcho_3024
Name: Lcho_3024
Funciton: ABC transporter, permease protein
Locus tag: Lcho_3023
Name: Lcho_3023
Funciton: Isochorismatase hydrolase (EC 3.3.2.1)
Locus tag: Lcho_3022
Name: Lcho_3022
Funciton: ABC transporter ATP-binding protein
Locus tag: Lcho_3021
Name: Lcho_3021
Funciton: Isochorismatase hydrolase (EC 3.3.2.1)
Locus tag: Lcho_3020
Name: Daci_3836
Funciton: Transcriptional regulator, GntR family
uahA
Allophanate hydrolase (EC 3.5.1.54)
hypothetical protein
hypothetical protein
gatA
amidase AtzE family
Lcho_3027
putative protein for oxalurate utilization
Lcho_3026
ABC transporter, periplasmic ligand binding protein, Bmp family
Lcho_3025
ABC transporter, permease protein
Lcho_3024
ABC transporter, permease protein
Lcho_3023
Isochorismatase hydrolase (EC 3.3.2.1)
Lcho_3022
ABC transporter ATP-binding protein
Lcho_3021
Isochorismatase hydrolase (EC 3.3.2.1)
Daci_3836
Transcriptional regulator, GntR family
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD