Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of IdnR in Rhizobium leguminosarum bv. viciae 3841

Properties
Regulator type: Transcription factor
TF locus tag: pRL100388
Regulator family: LacI
Regulation mode: repressor
Biological process: Idonate utilization
Effector: L-idonate
Regulog: IdnR - Rhizobiales
Statistics of regulated genes:
- Genes 10
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 32 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -177
Score: 4.9
Sequence: TAAAGTTATCGCTATCATCG
Position: -41
Score: 6.1
Sequence: AGATGATATCGATAACAATT
Locus tag: pRL100387
Name: gnl
Funciton: Gluconolactonase (EC 3.1.1.17)
gnl
Gluconolactonase (EC 3.1.1.17)

Position: -68
Score: 6.8
Sequence: ATATGTTATCGATAACATAA
Locus tag: pRL100390
Name: COG1063
Funciton: Threonine dehydrogenase and related Zn-dependent dehydrogenases
Locus tag: pRL100389
Name: idnD
Funciton: L-idonate 5-dehydrogenase (EC 1.1.1.264)
COG1063
Threonine dehydrogenase and related Zn-dependent dehydrogenases
idnD
L-idonate 5-dehydrogenase (EC 1.1.1.264)

Position: -55
Score: 6.8
Sequence: AAATGTTATCGATAACATAC
Locus tag: pRL100394
Name: null
Funciton: Sugar ABC transporter, ATP-binding protein
Locus tag: pRL100395
Name: null
Funciton: Sugar ABC transporter, inner membrane protein
Locus tag: pRL100396
Name: null
Funciton: Sugar ABC transporter, substrate-binding protein
Sugar ABC transporter, ATP-binding protein
Sugar ABC transporter, inner membrane protein
Sugar ABC transporter, substrate-binding protein

Position: -104
Score: 6.8
Sequence: TTATGTTATCGATAACATAT
Locus tag: pRL100391
Name: idnO
Funciton: Gluconate 5-dehydrogenase (EC 1.1.1.69)
Locus tag: pRL100392
Name: idnK
Funciton: Gluconokinase (EC 2.7.1.12)
Locus tag: pRL100393
Name: gnd
Funciton: 6-phosphogluconate dehydrogenase EC=1.1.1.44
idnO
Gluconate 5-dehydrogenase (EC 1.1.1.69)
idnK
Gluconokinase (EC 2.7.1.12)
gnd
6-phosphogluconate dehydrogenase EC=1.1.1.44

Position: -268
Score: 6.1
Sequence: AATTGTTATCGATATCATCT
Position: -132
Score: 4.9
Sequence: CGATGATAGCGATAACTTTA
Locus tag: pRL100388
Name: idnR
Funciton: Predicted transcriptional regulator of L-idonate utilization, LacI family
idnR
Predicted transcriptional regulator of L-idonate utilization, LacI family
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD