Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of AraC in Salmonella typhimurium LT2

Properties
Regulator type: Transcription factor
TF locus tag: STM0104
Regulator family: AraC
Regulation mode: activator (repressor)
Biological process: Arabinose utilization
Effector: Arabinose
Regulog: AraC - Enterobacterales
Statistics of regulated genes:
- Genes 6
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 56 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -279
Score: 8.1
Sequence: TCAGGCAGGATCCGCTA-(4)-TATGGACAAAAATGCTA
Position: -205
Score: 8.4
Sequence: TGTGGACATTCCAGCCA-(4)-TATAGACACTTCTGTTA
Locus tag: STM0104
Name: araC
Funciton: Arabinose operon regulatory protein, AraC family
araC
Arabinose operon regulatory protein, AraC family

Position: -99
Score: 6.9
Sequence: TAGCCATTTAATCCATA-(4)-TGCCGTTTCCAGCCTGA
Locus tag: STM3016
Name: araE
Funciton: Low-affinity L-arabinose transport system proton symport protein
araE
Low-affinity L-arabinose transport system proton symport protein

Position: -173
Score: 8.4
Sequence: TAACAGAAGTGTCTATA-(4)-TGGCTGGAATGTCCACA
Position: -99
Score: 8.1
Sequence: TAGCATTTTTGTCCATA-(4)-TAGCGGATCCTGCCTGA
Locus tag: STM0103
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: STM0102
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: STM0101
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
araB
Ribulokinase (EC 2.7.1.16)
araA
L-arabinose isomerase (EC 5.3.1.4)
araD
L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)

Position: -134
Score: 7.1
Sequence: TAGCATAATAATGAATA-(4)-AAGACGGATAAGGAATG
Locus tag: STM0394
Name: araJ
Funciton: Protein AraJ precursor
araJ
Protein AraJ precursor
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD