Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of AraC in Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Properties
Regulator type: Transcription factor
TF locus tag: KPN_00063
Regulator family: AraC
Regulation mode: activator (repressor)
Biological process: Arabinose utilization
Effector: Arabinose
Regulog: AraC - Enterobacterales
Statistics of regulated genes:
- Genes 13
- Operons 6
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 56 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -277
Score: 8.5
Sequence: TCAGGCCGGATTCGCTA-(4)-TATGGATTATTTTGCTG
Position: -203
Score: 8.7
Sequence: TGTGGACTTTTCTGCCG-(4)-TATAGACACTTTTGTTA
Locus tag: KPN_00063
Name: araC
Funciton: Arabinose operon regulatory protein, AraC family
araC
Arabinose operon regulatory protein, AraC family

Position: -282
Score: 8.3
Sequence: CAAGGATAAGCCTGCTG-(4)-TATAGATGATCCTGCTA
Position: -207
Score: 7.2
Sequence: TATGTCATTTTTTGCTA-(4)-TATGTACGCAATTACTG
Locus tag: KPN_02396
Name: araF
Funciton: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
Locus tag: KPN_02395
Name: araG
Funciton: L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2)
Locus tag: KPN_02394
Name: araH
Funciton: L-arabinose transport system permease protein (TC 3.A.1.2.2)
araF
L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
araG
L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2)
araH
L-arabinose transport system permease protein (TC 3.A.1.2.2)

Position: -159
Score: 7.5
Sequence: CAGCAATATAGTCCATA-(4)-TGGCTTATCCTGCCTGA
Position: -73
Score: 4.9
Sequence: TGGCAGGAAAAAAATGA-(4)-AATCAGTAACGACTCTA
Locus tag: KPN_03264
Name: araE
Funciton: Low-affinity L-arabinose transport system proton symport protein
araE
Low-affinity L-arabinose transport system proton symport protein

Position: -172
Score: 8.7
Sequence: TAACAAAAGTGTCTATA-(4)-CGGCAGAAAAGTCCACA
Position: -98
Score: 8.5
Sequence: CAGCAAAATAATCCATA-(4)-TAGCGAATCCGGCCTGA
Locus tag: KPN_00062
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: KPN_00061
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: KPN_00060
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
araB
Ribulokinase (EC 2.7.1.16)
araA
L-arabinose isomerase (EC 5.3.1.4)
araD
L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)

Position: -310
Score: 4.4
Sequence: GGACGGTAAAGGCGACA-(4)-TAAAACCGACATCAACA
Locus tag: KPN_01860
Name: araJ
Funciton: Protein AraJ precursor
araJ
Protein AraJ precursor

Position: -324
Score: 7.4
Sequence: TGACATGAAAATCCATA-(4)-TAGCCACATCATGAATA
Locus tag: KPN_04622
Name: ytfQ
Funciton: Galactose/arabinose ABC transport system, periplasmic binding protein YtfQ precursor
Locus tag: KPN_04623
Name: ytfR
Funciton: Galactose/arabinose ABC transport system, ATP-binding protein YtfR (EC 3.6.3.17)
Locus tag: KPN_04624
Name: ytfT
Funciton: Galactose/arabinose ABC transport system, permease protein YtfT
Locus tag: KPN_04625
Name: yjfF
Funciton: Galactose/arabinose ABC transport system, permease protein YjfF
ytfQ
Galactose/arabinose ABC transport system, periplasmic binding protein YtfQ precursor
ytfR
Galactose/arabinose ABC transport system, ATP-binding protein YtfR (EC 3.6.3.17)
ytfT
Galactose/arabinose ABC transport system, permease protein YtfT
yjfF
Galactose/arabinose ABC transport system, permease protein YjfF
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