Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of AraC in Enterobacter sp. 638

Properties
Regulator type: Transcription factor
TF locus tag: Ent638_0611
Regulator family: AraC
Regulation mode: activator (repressor)
Biological process: Arabinose utilization
Effector: Arabinose
Regulog: AraC - Enterobacterales
Statistics of regulated genes:
- Genes 12
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 56 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -276
Score: 8.1
Sequence: TCAGGCAGGATCCGCTA-(4)-TATGGATTAAATTGCTG
Position: -202
Score: 8.6
Sequence: TGTGGACATTTCTGCCG-(4)-TATAGACACTTTTGTTA
Locus tag: Ent638_0611
Name: araC
Funciton: Arabinose operon regulatory protein, AraC family
araC
Arabinose operon regulatory protein, AraC family

Position: -283
Score: 7.6
Sequence: CAGGGACTTCTTAGCTG-(4)-TATGGATAATCTTGCTT
Position: -208
Score: 7.1
Sequence: TATGTCATTTCTCGCTG-(4)-TATGCACGCAATTACTG
Locus tag: Ent638_2476
Name: araF
Funciton: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
Locus tag: Ent638_2475
Name: araG
Funciton: L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2)
Locus tag: Ent638_2474
Name: araH
Funciton: L-arabinose transport system permease protein (TC 3.A.1.2.2)
araF
L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
araG
L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2)
araH
L-arabinose transport system permease protein (TC 3.A.1.2.2)

Position: -172
Score: 8.6
Sequence: TAACAAAAGTGTCTATA-(4)-CGGCAGAAATGTCCACA
Position: -98
Score: 8.1
Sequence: CAGCAATTTAATCCATA-(4)-TAGCGGATCCTGCCTGA
Locus tag: Ent638_0610
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: Ent638_0609
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: Ent638_0608
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
araB
Ribulokinase (EC 2.7.1.16)
araA
L-arabinose isomerase (EC 5.3.1.4)
araD
L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)

Position: -189
Score: 7.3
Sequence: TGACAGGAAAATCCATA-(4)-TAGCCACATATTCAATG
Locus tag: Ent638_0412
Name: ytfQ
Funciton: Galactose/arabinose ABC transport system, periplasmic binding protein YtfQ precursor
Locus tag: Ent638_0413
Name: ytfR
Funciton: Galactose/arabinose ABC transport system, ATP-binding protein YtfR (EC 3.6.3.17)
Locus tag: Ent638_0414
Name: ytfT
Funciton: Galactose/arabinose ABC transport system, permease protein YtfT
Locus tag: Ent638_0415
Name: yjfF
Funciton: Galactose/arabinose ABC transport system, permease protein YjfF
ytfQ
Galactose/arabinose ABC transport system, periplasmic binding protein YtfQ precursor
ytfR
Galactose/arabinose ABC transport system, ATP-binding protein YtfR (EC 3.6.3.17)
ytfT
Galactose/arabinose ABC transport system, permease protein YtfT
yjfF
Galactose/arabinose ABC transport system, permease protein YjfF

Position: -179
Score: 4.6
Sequence: TATAAATTAAGTATTTA-(4)-TAAATGATGATTATTCA
Position: -158
Score: 4.8
Sequence: TAAATGATGATTATTCA-(4)-AAGTTTAAATTGGAATA
Locus tag: Ent638_3294
Name: araE
Funciton: Low-affinity L-arabinose transport system proton symport protein
araE
Low-affinity L-arabinose transport system proton symport protein
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD