Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of TPP in Leptothrix cholodnii SP-6

Properties
Regulator type: RNA regulatory element
Name: TPP
RFAM: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Regulog: TPP - Comamonadaceae
Under regulation:
- Genes 6
- Operons 2
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -214
Score: 44.3
Sequence: CTCCCGCTCCGGGGT...
Locus tag: Lcho_2430
Name: thiC
Funciton: Thiamin biosynthesis protein ThiC
Locus tag: Lcho_2431
Name: thiO
Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: Lcho_2432
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: Lcho_2433
Name: thiG
Funciton: Thiazole biosynthesis protein ThiG
Locus tag: Lcho_2434
Name: thiDE
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiC
Thiamin biosynthesis protein ThiC
thiO
Glycine oxidase ThiO (EC 1.4.3.19)
thiS
Sulfur carrier protein ThiS
thiG
Thiazole biosynthesis protein ThiG
thiDE
Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)

Position: -151
Score: 50.8
Sequence: TTCCTTGCTGGGGGT...
Locus tag: Lcho_2203
Name: cytX
Funciton: Predicted hydroxymethylpyrimidine transporter CytX
cytX
Predicted hydroxymethylpyrimidine transporter CytX
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